Show simple item record

Bioinformatic and biometric methods in plant morphology

dc.contributor.authorPunyasena, Surangi W.
dc.contributor.authorSmith, Selena Y.
dc.date.accessioned2018-02-05T16:29:25Z
dc.date.available2018-02-05T16:29:25Z
dc.date.issued2014-08
dc.identifier.citationPunyasena, Surangi W.; Smith, Selena Y. (2014). "Bioinformatic and biometric methods in plant morphology." Applications in Plant Sciences 2(8): n/a-n/a.
dc.identifier.issn2168-0450
dc.identifier.issn2168-0450
dc.identifier.urihttps://hdl.handle.net/2027.42/141215
dc.publisherBotanical Society of America
dc.publisherWiley Periodicals, Inc.
dc.subject.othercharcoal shape
dc.subject.otherleaf shape
dc.subject.otherleaf venation
dc.subject.otherplant morphology
dc.subject.othermorphometrics
dc.subject.otherroot networks
dc.subject.otherpollen classification
dc.subject.otherautomation
dc.titleBioinformatic and biometric methods in plant morphology
dc.typeArticleen_US
dc.rights.robotsIndexNoFollow
dc.subject.hlbsecondlevelBiology
dc.subject.hlbsecondlevelBotany
dc.subject.hlbtoplevelScience
dc.description.peerreviewedPeer Reviewed
dc.contributor.affiliationumDepartment of Earth and Environmental Sciences and Museum of Paleontology, 1100 N. University Ave., University of Michigan, Ann Arbor, Michigan 48109 USA
dc.contributor.affiliationotherDepartment of Plant Biology, University of Illinois, 505 South Goodwin Ave., Urbana, Illinois 61801 USA
dc.description.bitstreamurlhttps://deepblue.lib.umich.edu/bitstream/2027.42/141215/1/aps31400071.pdf
dc.identifier.doi10.3732/apps.1400071
dc.identifier.sourceApplications in Plant Sciences
dc.identifier.citedreferencePeppe, D. J., D. L. Royer, B. Cariglino, S. Y. Oliver, S. Newman, E. Leight, G. Enikolopov, et al. 2011. Sensitivity of leaf size and shape to climate: Global patterns and paleoclimatic applications. New Phytologist 190: 724 – 739.
dc.identifier.citedreferenceBomfleur, B., S. McLoughlin, and V. Vajda. 2014. Fossilized nuclei and chromosomes reveal 180 million years of stasis in royal ferns. Science 343: 1376 – 1377.
dc.identifier.citedreferenceBucksch, A. 2014. A practical introduction to skeletons for the plant sciences. Applications in Plant Sciences 2 ( 8 ): 1400005. doi: 10.3732/apps.1400005.
dc.identifier.citedreferenceCope, J. S., D. Corney, J. Y. Clark, P. Remagnino, and P. Wilkin. 2012. Plant species identification using digital morphometrics: A review. Expert Systems with Applications 39: 7562 – 7573.
dc.identifier.citedreferenceCrawford, A. J.. and C. M. Belcher. 2014. Charcoal morphometry for paleoecological analysis: The effects of fuel type and transportation on morphological parameters. Applications in Plant Sciences 2 ( 8 ): 1400004. doi: 10.3732/apps.1400004.
dc.identifier.citedreferenceGreen, W. A., S. A. Little, C. A. Price, S. L. Wing, S. Y. Smith, B. Kotrc, and G. Doria. 2014. Reading the leaves: A comparison of leaf rank and automated areole measurement for quantifying aspects of leaf venation. Applications in Plant Sciences 2 ( 8 ): 1400006. doi: 10.3732/apps.1400006.
dc.identifier.citedreferenceHan, J. G., H. Cao, A. Barb, S. W. Punyasena, C. Jaramillo, and C.‐R. Shyu. 2014. A neotropical Miocene pollen database employing image‐based search and semantic modeling. Applications in Plant Sciences 2 ( 8 ): 1400030. doi: 10.3732/apps.1400030.
dc.identifier.citedreferenceHolt, K. A., and M. S. Bebbington. 2014. Separating morphologically similar pollen types using basic shape features from digital images: A preliminary study. Applications in Plant Sciences 2 ( 8 ): 1400032. doi: 10.3732/apps.1400032.
dc.identifier.citedreferenceKim, S., D. E. Soltis, P. S. Soltis, and Y. Suh. 2004. DNA sequences from Miocene fossils: An ndhF sequence of Magnolia latahensis (Magnoliaceae) and an rbcL sequence of Persea pseudocarolinensis (Lauraceae). American Journal of Botany 91: 615 – 620.
dc.identifier.citedreferenceKrieger, J. D. 2014. A protocol for the creation of useful geometric shape metrics illustrated with a newly derived geometric measure of leaf circularity. Applications in Plant Sciences 2 ( 8 ): 1400009. doi: 10.3732/apps.1400009.
dc.identifier.citedreferenceMander, L., S. J. Baker, C. M. Belcher, D. S. Haselhorst, J. Rodriguez, J. L. Thorn, S. Tiwani, et al. 2014. Accuracy and consistency of grass pollen identification by human analysts using electron micrographs of surface ornamentation. Applications in Plant Sciences 2 ( 8 ): 1400031. doi: 10.3732/apps.1400031.
dc.identifier.citedreferenceNiklas, K. J. 1994. Plant allometry: The scaling of form and process. University of Chicago Press, Chicago, Illinois, USA.
dc.identifier.citedreferenceNiklas, K. J., R. M. Brown Jr., and R. Santos. 1985. Ultrastructural states of preservation in Clarkia angiosperm leaf tissues: Implications on modes of fossilization. In C. J. Smiley [ed.], Late Cenozoic history of the Pacific Northwest, 143 – 160. Pacific Division of the American Association for the Advancement of Science, San Francisco, California, USA.
dc.identifier.citedreferenceNishida, H., K. P. Pigg, and J. F. Rigby. 2003. Palaeobotany: Swimming sperm in an extinct Gondwanan plant. Nature 422: 396 – 397.
dc.identifier.citedreferenceRoyer, D. L., P. Wilf, D. A. Janesko, E. A. Kowalski, and D. L. Dilcher. 2005. Correlations of climate and plant ecology to leaf size and shape: Potential proxies for the fossil record. American Journal of Botany 92: 1141 – 1151.
dc.identifier.citedreferenceSpicer, R. A. 2007. Recent and future developments of CLAMP: Building on the legacy of Jack A. Wolfe. Courier Forschungsinstitut Senckenberg 258: 109 – 118.
dc.identifier.citedreferenceWilf, P. 1997. When are leaves good thermometers? A new case for Leaf Margin Analysis. Paleobiology 23: 373 – 390.
dc.identifier.citedreferenceWolfe, J. A. 1993. A method of obtaining climatic parameters from leaf assemblages. U.S. Geological Survey Bulletin 2040: 1 – 71.
dc.identifier.citedreferenceWolfe, J. A., and R. A. Spicer. 1999. Fossil leaf character states: Multivariate analysis. In T. P. Jones and N. P. Rowe [eds.]. Fossil plants and spores: Modern techniques, 233 – 239. Geological Society, London, United Kingdom.
dc.owningcollnameInterdisciplinary and Peer-Reviewed


Files in this item

Show simple item record

Remediation of Harmful Language

The University of Michigan Library aims to describe library materials in a way that respects the people and communities who create, use, and are represented in our collections. Report harmful or offensive language in catalog records, finding aids, or elsewhere in our collections anonymously through our metadata feedback form. More information at Remediation of Harmful Language.

Accessibility

If you are unable to use this file in its current format, please select the Contact Us link and we can modify it to make it more accessible to you.