Deep Blue: Browsing by Author "Xiang, Zuoshuang"

A genome-wide MeSH-based literature mining system predicts implicit gene-to-gene relationships and networks

Xiang, Zuoshuang; Qin, Tingting; Qin, Zhaohui S; He, Yongqun (2013-10-16)

(1.3MB)

BBP:Brucellagenome annotation with literature mining and curation

Xiang, Zuoshuang; Zheng, Wenjie; He, Yongqun (2006-07-16)

(4.5MB)

Brucellosis Ontology (IDOBRU) as an extension of the Infectious Disease Ontology

Lin, Yu; Xiang, Zuoshuang; He, Yongqun (2011-10-31)

(760.5KB)

CLO: The cell line ontology

Sarntivijai, Sirarat; Lin, Yu; Xiang, Zuoshuang; Meehan, Terrence F; Diehl, Alexander D; Vempati, Uma D; Schürer, Stephan C; Pang, Chao; Malone, James; Parkinson, Helen; Liu, Yue; Takatsuki, Terue; Saijo, Kaoru; Masuya, Hiroshi; Nakamura, Yukio; Brush, Matthew H; Haendel, Melissa A; Zheng, Jie; Stoeckert, Christian J; Peters, Bjoern; Mungall, Christopher J; Carey, Thomas E; States, David J; Athey, Brian D; He, Yongqun (2014-08-13)

(1.3MB)

Development and application of an interaction network ontology for literature mining of vaccine-associated gene-gene interactions

Hur, Junguk; Özgür, Arzucan; Xiang, Zuoshuang; He, Yongqun (2015-01-06)

(1014.9KB)

DNAVaxDB: the first web-based DNA vaccine database and its data analysis

Racz, Rebecca; Li, Xinna; Patel, Mukti; Xiang, Zuoshuang; He, Yongqun (2014-03-19)

(1MB)

Genome-wide prediction of vaccine targets for human herpes simplex viruses using Vaxign reverse vaccinology

Xiang, Zuoshuang; He, Yongqun (2013-03-08)

(655.1KB)

Identification of fever and vaccine-associated gene interaction networks using ontology-based literature mining

Hur, Junguk; Özgür, Arzucan; Xiang, Zuoshuang; He, Yongqun (2012-12-20)

(691.6KB)

Meta-analysis of variables affecting mouse protection efficacy of whole organism Brucella vaccines and vaccine candidates

Todd, Thomas E; Tibi, Omar; Lin, Yu; Sayers, Samantha; Bronner, Denise N; Xiang, Zuoshuang; He, Yongqun (2013-04-17)

(514.5KB)

Mining of vaccine-associated IFN-γ gene interaction networks using the Vaccine Ontology

Özgür, Arzucan; Xiang, Zuoshuang; Radev, Dragomir R; He, Yongqun (2011-05-17)

(2.1MB)

OAE: The Ontology of Adverse Events

He, Yongqun; Sarntivijai, Sirarat; Lin, Yu; Xiang, Zuoshuang; Guo, Abra; Zhang, Shelley; Jagannathan, Desikan; Toldo, Luca; Tao, Cui; Smith, Barry (2014-07-05)

(1.5MB)

OntoFox: web-based support for ontology reuse

Xiang, Zuoshuang; Courtot, Mélanie; Brinkman, Ryan R; Ruttenberg, Alan; He, Yongqun (2010-06-22)

(2.1MB)

Ontology-based Brucella vaccine literature indexing and systematic analysis of gene-vaccine association network

Hur, Junguk; Xiang, Zuoshuang; Feldman, Eva L; He, Yongqun (2011-08-26)

(10MB)

Ontology-based collection, representation and analysis of drug-associated neuropathy adverse events

Guo, Abra; Racz, Rebecca; Hur, Junguk; Lin, Yu; Xiang, Zuoshuang; Zhao, Lili; Rinder, Jordan; Jiang, Guoqian; Zhu, Qian; He, Yongqun (2016-05-21)

(3MB)

Ontology-based collection, representation and analysis of drug-associated neuropathy adverse events

Guo, Abra; Racz, Rebecca; Hur, Junguk; Lin, Yu; Xiang, Zuoshuang; Zhao, Lili; Rinder, Jordan; Jiang, Guoqian; Zhu, Qian; He, Yongqun (2016-05-21)

(3MB)

Ontology-Based Combinatorial Comparative Analysis of Adverse Events Associated with Killed and Live Influenza Vaccines

Markel, Howard; Sarntivijai, Sirarat; Xiang, Zuoshuang; Shedden, Kerby A; Omenn, Gilbert S; Athey, Brian D; He, Yongqun (PLoS ONE, 2012-11-28)

(1.3MB)

Ontology-based representation and analysis of host-Brucella interactions

Lin, Yu; Xiang, Zuoshuang; He, Yongqun (2015-10-05)

(2.3MB)

PHIDIAS: a pathogen-host interaction data integration and analysis system

Xiang, Zuoshuang; Tian, Yuying; He, Yongqun (2007-07-30)

(3.2MB)

The eXtensible ontology development (XOD) principles and tool implementation to support ontology interoperability

He, Yongqun; Xiang, Zuoshuang; Zheng, Jie; Lin, Yu; Overton, James A; Ong, Edison (2018-01-12)

(2.2MB)