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- Creator:
- Reynolds, Mack B, Klein, Benjamin, McFadden, Michael J, Judge, Norah K, Navarrete, Hannah E, Michmerhuizen, Britton C, Awad, Dominik, Schultz, Tracey L, Harms, Paul W, Zhang, Li, O'Meara, Teresa R, Sexton, Jonathan Z, Lyssiotis, Costas A, Kahlenberg, J Michelle, and O'Riordan, Mary X
- Description:
- Targeted metabolomics analysis of primary WT murine bone marrow-derived macrophages (BMDM) mock-treated or infected with methicillin-resistant Staphylococcus aureus (MRSA) (File S1). Targeted metabolomics analysis of mock-treated or MRSA-infected WT or Ifnar1-/- iBMDM (File S2).
- Keyword:
- Metabolomics, Macrophage, Staphylococcus aureus, and Interferon
- Citation to related publication:
- Type I interferon governs immunometabolic checkpoints that coordinate inflammation during Staphylococcal infection Mack B. Reynolds, Benjamin Klein, Michael J. McFadden, Norah K. Judge, Hannah E. Navarrete, Britton C Michmerhuizen, Dominik Awad, Tracey L. Schultz, Paul W. Harms, Li Zhang, Teresa R. O’Meara, Jonathan Z. Sexton, Costas A. Lyssiotis, J. Michelle Kahlenberg, Mary X. O’Riordan bioRxiv 2024.01.10.575104; doi: https://doi.org/10.1101/2024.01.10.575104 and Reynolds et al., Type I Interferon governs immunometabolic checkpoints that coordinate inflammation during Staphylococcal infection, Cell Reports (2024), https://doi.org/10.1016/j.celrep.2024.114607
- Discipline:
- Science
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- Creator:
- University of Michigan Museum of Zoology
- Description:
- Scan of specimen ummz:mammals:100776 (Erignathus barbatus barbatus) - Skull. Raw Dataset includes 1601 TIF images (each 1385 x 1900 x 1 voxel at 0.09676982 mm resolution, derived from 1601 scan projections), xtek and vgi files for volume reconstruction. and Scan of specimen ummz:mammals:100776 (Erignathus barbatus barbatus) - Skull. Reconstructed Dataset includes 1440 TIF images (each 1385 x 1900 x 1 voxel at 0.096770 mm resolution, derived from 1601 scan projections), xtek and vgi files for volume reconstruction.
- Keyword:
- Animalia, Chordata, Mammalia, Carnivora, Phocidae, Erignathus barbatus barbatus, 1987312444, computed tomography, X-ray, and 3D
- Citation to related publication:
- For more information on the original UMMZ specimen, see: https://www.gbif.org/occurrence/1987312444
- Discipline:
- Science
-
- Creator:
- University of Michigan Museum of Zoology
- Description:
- Scan of specimen ummz:mammals:103505 (Erignathus barbatus NAUTICA) - Skull. Raw Dataset includes 1601 TIF images (each 1346 x 1927 x 1 voxel at 0.1103895 mm resolution, derived from 1601 scan projections), xtek and vgi files for volume reconstruction. and Scan of specimen ummz:mammals:103505 (Erignathus barbatus NAUTICA) - Skull. Reconstructed Dataset includes 1497 TIF images (each 1346 x 1927 x 1 voxel at 0.110390 mm resolution, derived from 1601 scan projections), xtek and vgi files for volume reconstruction.
- Keyword:
- Animalia, Chordata, Mammalia, Carnivora, Phocidae, Erignathus barbatus NAUTICA, 1987269380, computed tomography, X-ray, and 3D
- Citation to related publication:
- For more information on the original UMMZ specimen, see: https://www.gbif.org/occurrence/1987269380
- Discipline:
- Science
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- Creator:
- University of Michigan Museum of Zoology
- Description:
- Scan of specimen ummz:mammals:123394 (Potos flavus) - WholeBody. Raw Dataset includes 1601 TIF images (each 1237 x 1177 x 1 voxel at 0.04900547 mm resolution, derived from 1601 scan projections), xtek and vgi files for volume reconstruction. and Scan of specimen ummz:mammals:123394 (Potos flavus) - WholeBody. Reconstructed Dataset includes 1941 TIF images (each 1237 x 1177 x 1 voxel at 0.049005 mm resolution, derived from 1601 scan projections), xtek and vgi files for volume reconstruction.
- Keyword:
- Animalia, Chordata, Mammalia, Carnivora, Procyonidae, Potos flavus, 1987268876, computed tomography, X-ray, and 3D
- Citation to related publication:
- For more information on the original UMMZ specimen, see: https://www.gbif.org/occurrence/1987268876
- Discipline:
- Science
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- Creator:
- University of Michigan Museum of Zoology
- Description:
- Scan of specimen ummz:mammals:157859 (Uncia uncia) - Skull. Raw Dataset includes 1601 TIF images (each 1400 x 1858 x 1 voxel at 0.1052879 mm resolution, derived from 1601 scan projections), xtek and vgi files for volume reconstruction. and Scan of specimen ummz:mammals:157859 (Uncia uncia) - Skull. Reconstructed Dataset includes 1367 TIF images (each 1400 x 1858 x 1 voxel at 0.105288 mm resolution, derived from 1601 scan projections), xtek and vgi files for volume reconstruction.
- Keyword:
- Animalia, Chordata, Mammalia, Carnivora, Felidae, Uncia uncia, 1987332926, computed tomography, X-ray, and 3D
- Citation to related publication:
- For more information on the original UMMZ specimen, see: https://www.gbif.org/occurrence/1987332926
- Discipline:
- Science
-
- Creator:
- University of Michigan Museum of Zoology
- Description:
- Scan of specimen ummz:mammals:161319 (Prionailurus bengalensis chinensis) - Skull. Raw Dataset includes 1601 TIF images (each 1259 x 1245 x 1 voxel at 0.04473831 mm resolution, derived from 1601 scan projections), xtek and vgi files for volume reconstruction. and Scan of specimen ummz:mammals:161319 (Prionailurus bengalensis chinensis) - Skull. Reconstructed Dataset includes 1932 TIF images (each 1259 x 1245 x 1 voxel at 0.044738 mm resolution, derived from 1601 scan projections), xtek and vgi files for volume reconstruction.
- Keyword:
- Animalia, Chordata, Mammalia, Carnivora, Felidae, Prionailurus bengalensis chinensis, 1987260838, computed tomography, X-ray, and 3D
- Citation to related publication:
- For more information on the original UMMZ specimen, see: https://www.gbif.org/occurrence/1987260838
- Discipline:
- Science
-
- Creator:
- University of Michigan Museum of Zoology
- Description:
- Scan of specimen ummz:mammals:177443 (Phoca vitulina) - Skull. Raw Dataset includes 1601 TIF images (each 1921 x 1443 x 1 voxel at 0.09976429 mm resolution, derived from 1601 scan projections), xtek and vgi files for volume reconstruction. and Scan of specimen ummz:mammals:177443 (Phoca vitulina) - Skull. Reconstructed Dataset includes 1701 TIF images (each 1921 x 1443 x 1 voxel at 0.099764 mm resolution, derived from 1601 scan projections), xtek and vgi files for volume reconstruction.
- Keyword:
- Animalia, Chordata, Mammalia, Carnivora, Phocidae, Phoca vitulina, 1987259019, computed tomography, X-ray, and 3D
- Citation to related publication:
- For more information on the original UMMZ specimen, see: https://www.gbif.org/occurrence/1987259019
- Discipline:
- Science
-
- Creator:
- University of Michigan Museum of Zoology
- Description:
- Scan of specimen ummz:mammals:178190 (Leptailurus serval) - Skull. Raw Dataset includes 1601 TIF images (each 1881 x 1287 x 1 voxel at 0.06803631 mm resolution, derived from 1601 scan projections), xtek and vgi files for volume reconstruction. and Scan of specimen ummz:mammals:178190 (Leptailurus serval) - Skull. Reconstructed Dataset includes 1003 TIF images (each 1881 x 1287 x 1 voxel at 0.068036 mm resolution, derived from 1601 scan projections), xtek and vgi files for volume reconstruction.
- Keyword:
- Animalia, Chordata, Mammalia, Carnivora, Felidae, Leptailurus serval, 1987352337, computed tomography, X-ray, and 3D
- Citation to related publication:
- For more information on the original UMMZ specimen, see: https://www.gbif.org/occurrence/1987352337
- Discipline:
- Science
-
- Creator:
- University of Michigan Museum of Zoology
- Description:
- Scan of specimen ummz:mammals:95748 (Hyaena brunnea) - Skull. Raw Dataset includes 1601 TIF images (each 1427 x 1939 x 1 voxel at 0.117297 mm resolution, derived from 1601 scan projections), xtek and vgi files for volume reconstruction. and Scan of specimen ummz:mammals:95748 (Hyaena brunnea) - Skull. Reconstructed Dataset includes 1662 TIF images (each 1427 x 1939 x 1 voxel at 0.117297 mm resolution, derived from 1601 scan projections), xtek and vgi files for volume reconstruction.
- Keyword:
- Animalia, Chordata, Mammalia, Carnivora, Hyaenidae, Hyaena brunnea, 1987349598, computed tomography, X-ray, and 3D
- Citation to related publication:
- For more information on the original UMMZ specimen, see: https://www.gbif.org/occurrence/1987349598
- Discipline:
- Science
-
- Creator:
- A. Tapaswi, N. Cemalovic, K. Polemi, J. Sexton, and J. Colacino
- Description:
- MCF10A non-tumorigenic breast cells were dosed with environmental toxicants and stained with multiple cellular stains to study morphological perturbations. Following up on feature results, MCF10A cells were stained with an anti-beta catenin antibody to study beta catenin nuclear translocation. Cell profiler software was used to measure and export per cell data .CSV formats to be further analyze din BMDExpress2 and R studio
- Keyword:
- Breast cancer , Cell Painting, Chemical exposure, Benchmark dose, and Cell Profiler
- Discipline:
- Health Sciences