Work Description
Title: Data for the manuscript titled "Scale-free, programmable design of morphable chain loops of kilobots and colloidal motors" Open Access Deposited
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(2020). Data for the manuscript titled "Scale-free, programmable design of morphable chain loops of kilobots and colloidal motors" [Data set], University of Michigan - Deep Blue Data. https://doi.org/10.7302/czgw-2x26
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Files (Count: 9; Size: 763 MB)
Thumbnailthumbnail-column | Title | Original Upload | Last Modified | File Size | Access | Actions |
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README.md | 2020-03-25 | 2020-03-25 | 1003 Bytes | Open Access |
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arrows_folding.zip | 2020-03-25 | 2020-03-25 | 54.2 MB | Open Access |
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curved_triangle.zip | 2020-03-23 | 2020-03-23 | 79.4 MB | Open Access |
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bending_vs_variation.zip | 2020-03-23 | 2020-03-23 | 108 MB | Open Access |
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example_shapes.zip | 2020-03-23 | 2020-03-23 | 167 MB | Open Access |
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nskT_vs_fakT.zip | 2020-03-23 | 2020-03-23 | 79.8 MB | Open Access |
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stability.zip | 2020-03-25 | 2020-03-25 | 194 MB | Open Access |
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tuning_design_forM.zip | 2020-03-23 | 2020-03-23 | 18.7 MB | Open Access |
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two_neighbor_cds_segments_.zip | 2020-03-23 | 2020-03-23 | 62.3 MB | Open Access |
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Activeloops
Public data repository for the active loops paper published in PNAS journal.
The glotzerlab software packages used here are
hoomd-blue: https://glotzerlab.engin.umich.edu/hoomd-blue/
glotzformats: https://glotzerlab.engin.umich.edu/glotzformats/
signac: https://signac.io/
FFMPEG: https://www.ffmpeg.org
Python version : 3.4.6
Important files that work together in a folder are:
dump.tar is the trajectory file of a simulation | read using glotzformats (now garnett)
run.py is the simulation script that generates dump.tar using HOOMD-blue
visualize.py that reads dump.tar and generates image/movie using Matplotlib / FFMPEG
signac_script.py if present in a folder, is a signac script that generates statepoints,
which are hash-mapped folders inside the sub-folder . The script also copies the files
The three main funcitons that signac_script uses are initialize_jobs, edit_files and run.