Supplemental Dataset 6

Chigumba, Desnor

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Work Description

Title: Supplemental Dataset 6 Tombstone Deposited

Attribute	Value
Methodology	Database Search with MSGF+ MS-GF+ v1.3.0 was used on the ProteoSAFe server ( https://proteomics.ucsd.edu/ProteoSAFe/index.jsp). The instrument was set to ESI-ION-TRAP and Fragmentation method set to “specified in spectrum file”. The Parent Mass Tolerance was set to 20PMM with allowed number of non-enzymatic termini and maximum number of PTMs permitted in a single peptide set to 1. For the closed/default search (“no_dehydro”), methionine oxidation was selected as an allowed PTM. For the cyclization massoffset search (“with_dehydro”), in addition to methionine oxidation, -2.10158, and -4.03136 Da were added as optional PTMs applicable on any amino acid residue.
Description	Database Search with MSGF+ of BURP domain proteins
Creator	Chigumba, Desnor
Creator ORCID iD	https://orcid.org/0000-0001-9785-5432
Depositor	[email protected]
Contact information	[email protected]
Discipline	Science
Keyword	proteomics
Resource type	Dataset
Last modified	10/10/2024
Published	10/10/2024
Language	English
DOI	https://doi.org/10.7302/4kpv-wv33
Ticket	https://teamdynamix.umich.edu/TDNext/Apps/87/Tickets/TicketDet?TicketID=6258235
License	http://creativecommons.org/licenses/by-nc/4.0/
View Users	[email protected]
Edit Users	[email protected]
View Groups	public
View Groups	admin

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