Work Description

Title: CRIMSON open source project - Supplementary Material for PLOS Computational Biology Publication Open Access Deposited

O
Attribute Value
Methodology
  • This data package contains the supplementary data files for the journal article "CRIMSON: An Open-Source Software Framework for Cardiovascular Integrated Modelling and Simulation", published in PLOS Computational Biology. Please see that article for instructions.
Description
  • This repository includes the following:

  • - Example Case A: complete process of creating a model, running the simulation and examining the results.

  • - Example Case B: segmenting and imposing a patient-specific aortic inflow velocity profile from a provide PC-MRI dataset.

  • - Example Case C: simulation of a patient under rest conditions, and then of the same patient under post-liver-transplant conditions.

  • - GUI Windows Binary Executable (version 2019.11.01)

  • - Flow Solver Windows Binary Executable (version 1.4.4, 2019.11.01)
Creator
Depositor
Contact information
Discipline
Funding agency
  • Other Funding Agency
Other Funding agency
  • American Heart Association (Grant Grant Agreement n. 307532) European Research Council (Grant Agreement n. 307532)National Institutes of Health (Grants U01 HL135842 and R01 HL105297)
Keyword
Citations to related material
  • CRIMSON: An Open-Source Software Framework for Cardiovascular Integrated Modelling and Simulation C.J. Arthurs, R. Khlebnikov, A. Melville, M. Marčan, A. Gomez, D. Dillon-Murphy, F. Cuomo, M.S. Vieira, J. Schollenberger, S.R. Lynch, C. Tossas-Betancourt, K. Iyer, S. Hopper, E. Livingston, P. Youssefi, A. Noorani, S. Ben Ahmed, F.J.H. Nauta, T.M.J. van Bakel, Y. Ahmed, P.A.J. van Bakel, J. Mynard, P. Di Achille, H. Gharahi, K. D. Lau, V. Filonova, M. Aguirre, N. Nama, N. Xiao, S. Baek, K. Garikipati, O. Sahni, D. Nordsletten, C.A. Figueroa bioRxiv 2020.10.14.339960; doi: https://doi.org/10.1101/2020.10.14.339960
Resource type
Last modified
  • 11/17/2022
Published
  • 04/20/2021
DOI
  • https://doi.org/10.7302/4vdx-ek59
License
To Cite this Work:
Arthurs, C. J., Khlebnikov, R., Melville, A., Marčan, M., Gomez, A., Dillon-Murphy, D., Cuomo, F., Vieira, M., Schollenberger, J., Lynch, S., Tossas-Betancourt, C., Iyer, K., Hopper, S., Livingston, E., Youssefi, P., Noorani, A., Ben Ahmed, S., Nauta, F. J., van Bakel, T. M., Ahmed, Y., van Bakel, P. A., Mynard, J., Di Achille, P., Gharahi, H., Lau, K. D., Filonova, V., Aguirre, M., Nama, N., Xiao, N., Baek, S., Garikipati, K., Sahni, O., Nordsletten, D., Figueroa, C. A. (2021). CRIMSON open source project - Supplementary Material for PLOS Computational Biology Publication [Data set], University of Michigan - Deep Blue Data. https://doi.org/10.7302/4vdx-ek59

Relationships

In Collection:

Files (Count: 2; Size: 452 MB)

Thumbnailthumbnail-column Title Original Upload Last Modified File Size Access Actions
README.txt 2021-04-20 2021-04-20 222 Bytes Open Access
PLOS_Comp_Biology_Supplementary_...al.7z 2021-04-07 2021-04-07 452 MB Open Access

This data package contains the supplementary data files for the journal article "CRIMSON: An Open-Source Software Framework for Cardiovascular Integrated Modelling and Simulation". Please see that article for instructions.

Download All Files (To download individual files, select them in the “Files” panel above)

Best for data sets < 3 GB. Downloads all files plus metadata into a zip file.

Files are ready   Download Data from Globus
Best for data sets > 3 GB. Globus is the platform Deep Blue Data uses to make large data sets available.   More about Globus

Remediation of Harmful Language

The University of Michigan Library aims to describe its collections in a way that respects the people and communities who create, use, and are represented in them. We encourage you to contact us anonymously if you encounter harmful or problematic language in catalog records or finding aids. More information about our policies and practices is available at Remediation of Harmful Language.