Work Description

Title: Computed tomography voxel dataset for ummz:mammals:111984-Handleyomys ALFAROI ALFAROI-WholeBody Open Access Deposited

https://creativecommons.org/licenses/by-nc-sa/4.0/
Attribute Value
Methodology
  • This dataset was created at the University of Michigan Museum of Zoology using a procedure involving computed tomography (CT) hardware. After retrieving the specimen from the museum's archives, staff secured the specimen in the Nikon XT H 225 ST and initiated the scanning process, which included capturing projections by rotating the specimen. The device's associated software CT-Pro-3D and the projections were then used to reconstruct a set of TIFF images, with each corresponding to a slice of the three-dimensional object (one voxel in height). In addition, the software created a .xtek volume file (included here), which contains details about the scanning environment, projections, and reconstructions.
Description
  • Scan of specimen ummz:mammals:111984 (Handleyomys ALFAROI ALFAROI) - WholeBody. Raw Dataset includes 1601 TIF images (each 815 x 1310 x 1 voxel at 0.0421497172804555 mm resolution, derived from 1601 scan projections), xtek and vgi files for volume reconstruction.

  • Scan of specimen ummz:mammals:111984 (Handleyomys ALFAROI ALFAROI) - WholeBody. Reconstructed Dataset includes 2000 TIF images (each 815 x 1310 x 1 voxel at 0.042150 mm resolution, derived from 1601 scan projections), xtek and vgi files for volume reconstruction.
Creator
Depositor
  • sborda@umich.edu
Contact information
Discipline
Keyword
Date coverage
  • 2019-05-24
Citations to related material
Resource type
Last modified
  • 02/07/2020
Published
  • 02/07/2020
Language
DOI
  • https://doi.org/10.7302/yjqy-xs73
License
To Cite this Work:
University of Michigan Museum of Zoology (2020). Computed tomography voxel dataset for ummz:mammals:111984-Handleyomys ALFAROI ALFAROI-WholeBody [Data set]. University of Michigan - Deep Blue. https://doi.org/10.7302/yjqy-xs73

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Files (Count: 4; Size: 14.3 GB)

Thumbnail Title Original Upload Last Modified File Size Access Actions
Raw-WholeBody-ummz-mammals-11198...6.zip 2020-02-07 2020-02-07 10.8 GB Open Access
ummz-mammals-111984_Handleyomys-...6.tif 2020-02-07 2020-02-07 7.63 MB Open Access
Recon-WholeBody-ummz-mammals-111...6.zip 2020-02-07 2020-02-07 3.49 GB Open Access
ummz-mammals-111984_Handleyomys-...8.tif 2020-02-07 2020-02-07 2.04 MB Open Access

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