Far‐Red Organic Fluorophores Contain a Fluorescent Impurity
dc.contributor.author | Stone, Matthew B. | en_US |
dc.contributor.author | Veatch, Sarah L. | en_US |
dc.date.accessioned | 2014-08-06T16:49:36Z | |
dc.date.available | WITHHELD_13_MONTHS | en_US |
dc.date.available | 2014-08-06T16:49:36Z | |
dc.date.issued | 2014-08-04 | en_US |
dc.identifier.citation | Stone, Matthew B.; Veatch, Sarah L. (2014). "Far‐Red Organic Fluorophores Contain a Fluorescent Impurity." ChemPhysChem 15(11): 2240-2246. | en_US |
dc.identifier.issn | 1439-4235 | en_US |
dc.identifier.issn | 1439-7641 | en_US |
dc.identifier.uri | https://hdl.handle.net/2027.42/108014 | |
dc.description.abstract | Far‐red organic fluorophores commonly used in traditional and super‐resolution localization microscopy are found to contain a fluorescent impurity with green excitation and near‐red emission. This near‐red fluorescent impurity can interfere with some multicolor stochastic optical reconstruction microscopy/photoactivated localization microscopy measurements in live cells and produce subtle artifacts in chemically fixed cells. We additionally describe alternatives to avoid artifacts in super‐resolution localization microscopy. A near‐red fluorescent impurity is characterized in several commonly used far‐red fluorescent dyes. This impurity can lead to artifacts in live‐cell multicolor super‐resolution measurements, subtle artifacts in chemically fixed cells, and highlights the importance of controls in super‐resolution imaging. | en_US |
dc.publisher | WILEY‐VCH Verlag | en_US |
dc.subject.other | Fluorescence | en_US |
dc.subject.other | Fluorescent Probes | en_US |
dc.subject.other | Live Cells | en_US |
dc.subject.other | Quantitative Imaging | en_US |
dc.subject.other | Super‐Resolution Imaging | en_US |
dc.title | Far‐Red Organic Fluorophores Contain a Fluorescent Impurity | en_US |
dc.type | Article | en_US |
dc.rights.robots | IndexNoFollow | en_US |
dc.subject.hlbsecondlevel | Physics | en_US |
dc.subject.hlbsecondlevel | Chemistry | en_US |
dc.subject.hlbtoplevel | Science | en_US |
dc.description.peerreviewed | Peer Reviewed | en_US |
dc.contributor.affiliationum | Department of Biophysics, University of Michigan, 930 N University, Ann Arbor MI 48109 (USA) | en_US |
dc.description.bitstreamurl | http://deepblue.lib.umich.edu/bitstream/2027.42/108014/1/2240_ftp.pdf | |
dc.description.bitstreamurl | http://deepblue.lib.umich.edu/bitstream/2027.42/108014/2/cphc_201402002_sm_miscellaneous_information.pdf | |
dc.identifier.doi | 10.1002/cphc.201402002 | en_US |
dc.identifier.source | ChemPhysChem | en_US |
dc.identifier.citedreference | M. S. Gunewardene, F. V. Subach, T. J. Gould, G. P. Penoncello, M. V. Gudheti, V. V. Verkhusha, S. T. Hess, Biophys. J. 2011, 101, 1522 – 1528. | en_US |
dc.identifier.citedreference | S. L. Veatch, B. B. Machta, S. A. Shelby, E. N. Chiang, D. A. Holowka, B. A. Baird, PloS One 2012, 7, e 31457. | en_US |
dc.identifier.citedreference | T. Toplak, E. Pandzic, L. Chen, M. Vicente‐Manzanares, A. R. Horwitz, P. W. Wiseman, Biophys. J. 2012, 103, 1672 – 1682. | en_US |
dc.identifier.citedreference | A. Dupont, K. Stirnnagel, D. Lindemann, D. C. Lamb, Biophys. J. 2013, 104, 2373 – 2382. | en_US |
dc.identifier.citedreference | S. A. McKinney, C. S. Murphy, K. L. Hazelwood, M. W. Davidson, L. L. Looger, Nat. Methods 2009, 6, 131 – 133. | en_US |
dc.identifier.citedreference | M. Zhang, H. Chang, Y. Zhang, J. Yu, L. Wu, W. Ji, J. Chen, B. Liu, J. Lu, Y. Liu, et al., Nat. Methods 2012, 9, 727 – 729. | en_US |
dc.identifier.citedreference | A. K. Chibisov, G. V. Zakharova, H. Görner, Phys. Chem. Chem. Phys. 2001, 3, 44 – 49. | en_US |
dc.identifier.citedreference | H. J. Gruber, C. D. Hahn, G. Kada, C. K. Riener, G. S. Harms, W. Ahrer, T. G. Dax, H. G. Knaus, Bioconjugate Chem. 2000, 11, 696 – 704. | en_US |
dc.identifier.citedreference | L. S. Churchman, Z. Ökten, R. S. Rock, J. F. Dawson, J. A. Spudich, Proc. Natl. Acad. Sci. USA 2005, 102, 1419 – 1423. | en_US |
dc.identifier.citedreference | H. Shroff, C. G. Galbraith, J. A. Galbraith, H. White, J. Gillette, S. Olenych, M. W. Davidson, E. Betzig, Proc. Natl. Acad. Sci. USA 2007, 104, 20308 – 20313. | en_US |
dc.identifier.citedreference | F. V. Subach, G. H. Patterson, S. Manley, J. M. Gillette, J. Lippincott‐Schwartz, V. V. Verkhusha, Nat. Methods 2009, 6, 153 – 159. | en_US |
dc.identifier.citedreference | G. Patterson, M. Davidson, S. Manley, J. Lippincott‐Schwartz, Annu. Rev. Phys. Chem. 2010, 61, 345 – 367. | en_US |
dc.identifier.citedreference | M. Bates, B. Huang, G. T. Dempsey, X. Zhuang, Science 2007, 317, 1749 – 1753. | en_US |
dc.identifier.citedreference | J. E. Berlier, A. Rothe, G. Buller, J. Bradford, D. R. Gray, B. J. Filanoski, W. G. Telford, S. Yue, J. Liu, C.‐Y. Cheung, et al., J. Histochem. Cytochem. 2003, 51, 1699 – 1712. | en_US |
dc.identifier.citedreference | F. V. Subach, G. H. Patterson, M. Renz, J. Lippincott‐Schwartz, V. V. Verkhusha, J. Am. Chem. Soc. 2010, 132, 6481 – 6491. | en_US |
dc.identifier.citedreference | J. C. M. Gebhardt, D. M. Suter, R. Roy, Z. W. Zhao, A. R. Chapman, S. Basu, T. Maniatis, X. S. Xie, Nat. Methods 2013, 10, 421 – 426. | en_US |
dc.identifier.citedreference | A. Gahlmann, J. L. Ptacin, G. Grover, S. Quirin, A. R. S. von Diezmann, M. K. Lee, M. P. Backlund, L. Shapiro, R. Piestun, W. E. Moerner, Nano Lett. 2013, 13, 987 – 993. | en_US |
dc.identifier.citedreference | S. Semrau, L. Holtzer, M. González‐Gaitán, T. Schmidt, Biophys. J. 2011, 100, 1810 – 1818. | en_US |
dc.identifier.citedreference | I. Izeddin, C. G. Specht, M. Lelek, X. Darzacq, A. Triller, C. Zimmer, M. Dahan, PloS One 2011, 6, e 15611. | en_US |
dc.identifier.citedreference | S. Wilmes, M. Staufenbiel, D. Lisse, C. P. Richter, O. Beutel, K. B. Busch, S. T. Hess, J. Piehler, Angew. Chem. 2012, 124, 4952 – 4955; Angew. Chem. Int. Ed. 2012, 51, 4868 – 4871. | en_US |
dc.identifier.citedreference | U. Endesfelder, S. Malkusch, B. Flottmann, J. Mondry, P. Liguzinski, P. J. Verveer, M. Heilemann, Molecules 2011, 16, 3106 – 3118. | en_US |
dc.identifier.citedreference | S.‐H. Shim, C. Xia, G. Zhong, H. P. Babcock, J. C. Vaughan, B. Huang, X. Wang, C. Xu, G.‐Q. Bi, X. Zhuang, Proc. Natl. Acad. Sci. USA 2012, ##DOI:. | en_US |
dc.identifier.citedreference | V. Mennella, B. Keszthelyi, K. L. McDonald, B. Chhun, F. Kan, G. C. Rogers, B. Huang, D. A. Agard, Nat. Cell Biol. 2012, 14, 1159 – 1168. | en_US |
dc.identifier.citedreference | S. A. Jones, S.‐H. Shim, J. He, X. Zhuang, Nat. Methods 2011, 8, 499 – 505. | en_US |
dc.identifier.citedreference | I. Nikić, T. Plass, O. Schraidt, J. Szymański, J. A. G. Briggs, C. Schultz, E. A. Lemke, Angew. Chem. 2014, 126, 2278 – 2282; Angew. Chem. Int. Ed. 2014, 53, 2245 – 2249. | en_US |
dc.identifier.citedreference | J. R. Grover, G. N. Llewellyn, F. Soheilian, K. Nagashima, S. L. Veatch, A. Ono, J. Virol. 2013, JVI. 03526 ‐ 12. | en_US |
dc.identifier.citedreference | D. Kim, N. M. Curthoys, M. T. Parent, S. T. Hess, J. Opt. 2013, 15, 094011. | en_US |
dc.identifier.citedreference | P. S. Pyenta, D. Holowka, B. Baird, Biophys. J. 2001, 80, 2120 – 2132. | en_US |
dc.identifier.citedreference | J. Widengren, P. Schwille, J. Phys. Chem. A 2000, 104, 6416 – 6428. | en_US |
dc.identifier.citedreference | H. S. Muddana, T. T. Morgan, J. H. Adair, P. J. Butler, Nano Lett. 2009, 9, 1559 – 1566. | en_US |
dc.identifier.citedreference | M. Heilemann, E. Margeat, R. Kasper, M. Sauer, P. Tinnefeld, J. Am. Chem. Soc. 2005, 127, 3801 – 3806. | en_US |
dc.identifier.citedreference | T. Ha, P. Tinnefeld, Annu. Rev. Phys. Chem. 2012, 63, 595 – 617. | en_US |
dc.identifier.citedreference | G. T. Dempsey, J. C. Vaughan, K. H. Chen, M. Bates, X. Zhuang, Nat. Methods 2011, 8, 1027 – 1036. | en_US |
dc.identifier.citedreference | G. T. Dempsey, M. Bates, W. E. Kowtoniuk, D. R. Liu, R. Y. Tsien, X. Zhuang, J. Am. Chem. Soc. 2009, 131, 18192 – 18193. | en_US |
dc.identifier.citedreference | H. Bock, C. Geisler, C. A. Wurm, C. von Middendorff, S. Jakobs, A. Schönle, A. Egner, S. W. Hell, C. Eggeling, Appl. Phys. B 2007, 88, 161 – 165. | en_US |
dc.owningcollname | Interdisciplinary and Peer-Reviewed |
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