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Genomic tests of the species‐pump hypothesis: Recent island connectivity cycles drive population divergence but not speciation in Caribbean crickets across the Virgin Islands
dc.contributor.authorPapadopoulou, Annaen_US
dc.contributor.authorKnowles, L. Laceyen_US
dc.date.accessioned2015-07-01T20:55:45Z
dc.date.available2016-07-05T17:27:58Zen
dc.date.issued2015-06en_US
dc.identifier.citationPapadopoulou, Anna; Knowles, L. Lacey (2015). "Genomic tests of the species‐pump hypothesis: Recent island connectivity cycles drive population divergence but not speciation in Caribbean crickets across the Virgin Islands." Evolution 69(6): 1501-1517.en_US
dc.identifier.issn0014-3820en_US
dc.identifier.issn1558-5646en_US
dc.identifier.urihttps://hdl.handle.net/2027.42/111904
dc.publisherThe New York Botanical Garden Pressen_US
dc.publisherWiley Periodicals, Inc.en_US
dc.subject.othersea‐level changeen_US
dc.subject.otherRad‐seqen_US
dc.subject.otherBiogeographyen_US
dc.subject.otherPleistocene Aggregate Island Complexen_US
dc.titleGenomic tests of the species‐pump hypothesis: Recent island connectivity cycles drive population divergence but not speciation in Caribbean crickets across the Virgin Islandsen_US
dc.typeArticleen_US
dc.rights.robotsIndexNoFollowen_US
dc.subject.hlbsecondlevelEcology and Evolutionary Biologyen_US
dc.subject.hlbtoplevelScienceen_US
dc.description.peerreviewedPeer Revieweden_US
dc.description.bitstreamurlhttp://deepblue.lib.umich.edu/bitstream/2027.42/111904/1/evo12667-sup-0001-SuppMat.pdf
dc.description.bitstreamurlhttp://deepblue.lib.umich.edu/bitstream/2027.42/111904/2/evo12667.pdf
dc.identifier.doi10.1111/evo.12667en_US
dc.identifier.sourceEvolutionen_US
dc.identifier.citedreferenceRhymer, J. M., and D. Simberloff. 1996. Extinction by hybridization and introgression. Annu. Rev. Ecol. Syst. 27: 83 – 109.en_US
dc.identifier.citedreferenceSchluter, D., and G. L. Conte. 2009. Genetics and ecological speciation. Proc. Natl. Acad. Sci. USA 106 ( Suppl 1 ): 9955 – 9962.en_US
dc.identifier.citedreferenceSeehausen, O. 2006. Conservation: losing biodiversity by reverse speciation. Curr. Biol. 16: R334 – R337.en_US
dc.identifier.citedreferenceSiler, C. D., J. R. Oaks, J. A. Esselstyn, A. C. Diesmos, and R. M. Brown. 2010. Phylogeny and biogeography of Philippine bent‐toed geckos (Gekkonidae: Cyrtodactylus) contradict a prevailing model of Pleistocene diversification. Mol. Phylogenet. Evol. 55: 699 – 710.en_US
dc.identifier.citedreferenceSlatkin, M. 1977. Gene flow and genetic drift in a species subject to frequent local extinctions. Theor. Popul. Biol. 12: 253 – 262.en_US
dc.identifier.citedreferenceSlatkin, M. 1985. Gene flow in natural populations. Annu. Rev. Ecol. Syst. 16: 393 – 430.en_US
dc.identifier.citedreferenceSly, N. D., A. K. Townsend, C. C. Rimmer, J. M. Townsend, S. C. Latta, and I. J. Lovette. 2011. Ancient islands and modern invasions: disparate phylogeographic histories among Hispaniola's endemic birds. Mol. Ecol. 20: 5012 – 5024.en_US
dc.identifier.citedreferenceStamatakis, A. 2014. RAxML version 8: a tool for phylogenetic analysis and post‐analysis of large phylogenies. Bioinformatics 30: 1312 – 1313.en_US
dc.identifier.citedreferenceTaylor, E., J. Boughman, M. Groenenboom, M. Sniatynski, D. Schluter, and J. Gow. 2006. Speciation in reverse: morphological and genetic evidence of the collapse of a three‐spined stickleback ( Gasterosteus aculeatus ) species pair. Mol. Ecol. 15: 343 – 355.en_US
dc.identifier.citedreferenceTeam, R. C. 2013. R: a language and environment for statistical computing. R Foundation for Statistical Computing, Vienna.en_US
dc.identifier.citedreferenceThorpe, R. S., Y. Surget‐Groba, and H. Johansson. 2008. The relative importance of ecology and geographic isolation for speciation in anoles. Philos. Trans. R. Soc. B‐Biol. Sci. 363: 3071 – 3081.en_US
dc.identifier.citedreferenceThorpe, R. S., Y. Surget‐Groba, and H. Johansson. 2010. Genetic tests for ecological and allopatric speciation in anoles on an island archipelago. PLoS Genet 6: e1000929.en_US
dc.identifier.citedreferenceThorpe, R. S., Y. Surget‐Groba, and H. Johansson. 2012. Quantitative traits and mode of speciation in Martinique anoles. Mol. Ecol. 21: 5299 – 5308.en_US
dc.identifier.citedreferenceWagner, C. E., I. Keller, S. Wittwer, O. M. Selz, S. Mwaiko, L. Greuter, A. Sivasundar, and O. Seehausen. 2013. Genome‐wide RAD sequence data provide unprecedented resolution of species boundaries and relationships in the Lake Victoria cichlid adaptive radiation. Mol. Ecol. 22: 787 – 798.en_US
dc.identifier.citedreferenceWang, C., Z. A. Szpiech, J. H. Degnan, M. Jakobsson, T. J. Pemberton, J. A. Hardy, A. B. Singleton, and N. A. Rosenberg. 2010. Comparing spatial maps of human population‐genetic variation using Procrustes analysis. Stat. Appl. Genet. Mol. Biol. 9.en_US
dc.identifier.citedreferenceWang, C., S. Zöllner, and N. A. Rosenberg. 2012. A quantitative comparison of the similarity between genes and geography in worldwide human populations. PLoS Genet. 8: e1002886.en_US
dc.identifier.citedreferenceWang, I. J., R. E. Glor, and J. B. Losos. 2013. Quantifying the roles of ecology and geography in spatial genetic divergence. Ecol. Lett. 16: 175 – 182.en_US
dc.identifier.citedreferenceWhetten, J. T. 1966. Geology of St. Croix, US Virgin Islands. Geol. Soc. Am. Memoirs 98: 177 – 240.en_US
dc.identifier.citedreferenceWilliams, E. E. 1983. Ecomorphs, faunas, island size, and diverse end points in island radiations of Anolis. Pp. 326 – 370 in R. B. Huey, E. R. Pianka, and T. W. Schoener, eds. Lizard ecology: studies of a model organism. Harvard Univ. Press, Cambridge, MA.en_US
dc.identifier.citedreferenceZheng, X., D. Levine, J. Shen, S. M. Gogarten, C. Laurie, and B. S. Weir. 2012. A high‐performance computing toolset for relatedness and principal component analysis of SNP data. Bioinformatics 28: 3326 – 3328.en_US
dc.identifier.citedreferenceAcevedo‐Rodriguez, P. 1996. Flora of St. John, U.S. Virgin Islands. The New York Botanical Garden Press, Bronx, New York.en_US
dc.identifier.citedreferenceAllmon, W. D. 1992. A causal analysis of stages in allopatric speciation. Oxford Surv. Evol. Biol. 8: 219 – 219.en_US
dc.identifier.citedreferenceArnold, B., R. Corbett‐Detig, D. Hartl, and K. Bomblies. 2013. RADseq underestimates diversity and introduces genealogical biases due to nonrandom haplotype sampling. Mol. Ecol. 22: 3179 – 3190.en_US
dc.identifier.citedreferenceBrown, R., and A. Diesmos. 2009. Philippines, biology. Encyclopedia of Islands. California Univ. Press, Berkeley, pp. 723 – 732.en_US
dc.identifier.citedreferenceBrown, R. M., C. D. Siler, C. H. Oliveros, J. A. Esselstyn, A. C. Diesmos, P. A. Hosner, C. W. Linkem, A. J. Barley, J. R. Oaks, M. B. Sanguila et al. 2013. Evolutionary processes of diversification in a Model Island Archipelago. Annu. Rev. Ecol. Syst. 44: 411 – 435.en_US
dc.identifier.citedreferenceCamoin, G., L. Montaggioni, and C. Braithwaite. 2004. Late glacial to post glacial sea levels in the Western Indian Ocean. Mar. Geol. 206: 119 – 146.en_US
dc.identifier.citedreferenceCatchen, J., P. A. Hohenlohe, S. Bassham, A. Amores, and W. A. Cresko. 2013. Stacks: an analysis tool set for population genomics. Mol. Ecol. 22: 3124 – 3140.en_US
dc.identifier.citedreferenceCatchen, J. M., A. Amores, P. Hohenlohe, W. Cresko, and J. H. Postlethwait. 2011. Stacks: building and genotyping loci de novo from short‐read sequences. G3 1: 171 – 182.en_US
dc.identifier.citedreferenceChifman, J., and L. Kubatko. 2014. Quartet inference from SNP data under the coalescent model. Bioinformatics 30:3317–3324.en_US
dc.identifier.citedreferenceCrispo, E., P. Bentzen, D. N. Reznick, M. T. Kinnison, and A. P. Hendry. 2006. The relative influence of natural selection and geography on gene flow in guppies. Mol. Ecol. 15: 49 – 62.en_US
dc.identifier.citedreferenceDavalos, L. M., and A. L. Russell. 2012. Deglaciation explains bat extinction in the Caribbean. Ecol. Evol. 2: 3045 – 3051.en_US
dc.identifier.citedreferenceDynesius, M., and R. Jansson. 2014. Persistence of within‐species lineages: a neglected control of speciation rates. Evolution 68: 923 – 934.en_US
dc.identifier.citedreferenceEarl, D. A. 2012. STRUCTURE HARVESTER: a website and program for visualizing STRUCTURE output and implementing the Evanno method. Conserv. Genet. Resour. 4: 359 – 361.en_US
dc.identifier.citedreferenceEdelaar, P., D. Alonso, S. Lagerveld, J. Senar, and M. Björklund. 2012. Population differentiation and restricted gene flow in Spanish crossbills: not isolation‐by‐distance but isolation‐by‐ecology. J. Evol. Biol. 25: 417 – 430.en_US
dc.identifier.citedreferenceEmerson, K. J., C. R. Merz, J. M. Catchen, P. A. Hohenlohe, W. A. Cresko, W. E. Bradshaw, and C. M. Holzapfel. 2010. Resolving postglacial phylogeography using high‐throughput sequencing. Proc. Nat. Acad. Sci. USA 107: 16196 – 16200.en_US
dc.identifier.citedreferenceEsselstyn, J. A., and R. M. Brown. 2009. The role of repeated sea‐level fluctuations in the generation of shrew (Soricidae: Crocidura) diversity in the Philippine Archipelago. Mol. Phylogenet. Evol. 53: 171 – 181.en_US
dc.identifier.citedreferenceEsselstyn, J. A., S. P. Maher, and R. M. Brown. 2011. Species interactions during diversification and community assembly in an island radiation of shrews. PLoS One 6: e21885.en_US
dc.identifier.citedreferenceEvanno, G., S. Regnaut, and J. Goudet. 2005. Detecting the number of clusters of individuals using the software STRUCTURE: a simulation study. Mol. Ecol. 14: 2611 – 2620.en_US
dc.identifier.citedreferenceExcoffier, L., I. Dupanloup, E. Huerta‐Sánchez, V. C. Sousa, and M. Foll. 2013. Robust demographic inference from genomic and SNP data. PLoS Genet. 9: e1003905.en_US
dc.identifier.citedreferenceExcoffier, L., and M. Foll. 2011. Fastsimcoal: a continuous‐time coalescent simulator of genomic diversity under arbitrarily complex evolutionary scenarios. Bioinformatics 27: 1332 – 1334.en_US
dc.identifier.citedreferenceFalk, B. G., and S. L. Perkins. 2013. Host specificity shapes population structure of pinworm parasites in Caribbean reptiles. Mol. Ecol. 22: 4576 – 4590.en_US
dc.identifier.citedreferenceFutuyma, D. J. 1987. On the role of species in anagenesis. Am. Nat. 130: 465 – 473.en_US
dc.identifier.citedreferenceGlor, R. E., M. E. Gifford, A. Larson, J. B. Losos, L. R. Schettino, A. R. Chamizo Lara, and T. R. Jackman. 2004. Partial island submergence and speciation in an adaptive radiation: a multilocus analysis of the Cuban green anoles. Proc. R. Soc. Lond. B Biol. Sci. 271: 2257 – 2265.en_US
dc.identifier.citedreferenceGlor, R. E., J. B. Losos, and A. Larson. 2005. Out of Cuba: overwater dispersal and speciation among lizards in the Anolis carolinensis subgroup. Mol. Ecol. 14: 2419 – 2432.en_US
dc.identifier.citedreferenceGore, S. 2013. Anegada: an emergent Pleistocene Reef Island. Pp. 47 – 60 in C. R. C. Sheppard, ed. Coral reefs of the world. Springer, Netherlands.en_US
dc.identifier.citedreferenceGorog, A. J., M. H. Sinaga, and M. D. Engstrom. 2004. Vicariance or dispersal? Historical biogeography of three Sunda shelf murine rodents ( Maxomys surifer, Leopoldamys sabanus and Maxomys whiteheadi ). Biol. J. Linn. Soc. 81: 91 – 109.en_US
dc.identifier.citedreferenceGrothe, P., L. Taylor, B. Eakins, K. Carignan, R. Caldwell, E. Lim, and D. Friday. 2012. Digital elevation models of the US Virgin Islands: procedures, data sources and analysis, NOAA technical memorandum NESDIS NGDC‐55. U.S. Dept. of Commerce, Boulder, CO.en_US
dc.identifier.citedreferenceGuillot, G., F. Rousset, and L. Harmon. 2013. Dismantling the Mantel tests. Methods Ecol. Evol. 4: 336 – 344.en_US
dc.identifier.citedreferenceHarter, A. V., K. A. Gardner, D. Falush, D. L. Lentz, R. A. Bye, and L. H. Rieseberg. 2004. Origin of extant domesticated sunflowers in eastern North America. Nature 430: 201 – 205.en_US
dc.identifier.citedreferenceHe, Q., D. L. Edwards, and L. L. Knowles. 2013. Integrative testing of how environments from the past to the present shape genetic structure across landscapes. Evolution 67: 3386 – 3402.en_US
dc.identifier.citedreferenceHeaney, L. 1985. Zoogeographic evidence for middle and late Pleistocene land bridges to the Philippine Islands. Modern Quat. Res. Southeast Asia 9: 127 – 144.en_US
dc.identifier.citedreferenceHeaney, L. R. 1986. Biogeography of mammals in SE Asia: estimates of rates of colonization, extinction and speciation. Biol. J. Linn. Soc. 28: 127 – 165.en_US
dc.identifier.citedreferenceHeaney, L. R., J. S. Walsh, and A. T. Peterson. 2005. The roles of geological history and colonization abilities in genetic differentiation between mammalian populations in the Philippine archipelago. J. Biogeogr. 32: 229 – 247.en_US
dc.identifier.citedreferenceHeatwole, H., R. Levins, and M. Byers. 1981. Biogeography of the Puerto Rican Bank: geography, geology, vegetation, and general ecology. Atoll Res. Bull. 251: 1 – 62.en_US
dc.identifier.citedreferenceHeatwole, H., and F. MacKenzie. 1967. Herpetogeography of Puerto Rico. IV. Paleogeography, faunal similarity and endemism. Evolution 21: 429 – 438.en_US
dc.identifier.citedreferenceHedges, S. B. 1996. Historical biogeography of West Indian vertebrates. Annu. Rev. Ecol. Syst. 27: 163 – 196.en_US
dc.identifier.citedreference— S. B. 2006. Paleogeography of the Antilles and origin of West Indian terrestrial vertebrates. Annal. Missouri Bot. Garden 93: 231 – 244.en_US
dc.identifier.citedreferenceHedges, S. B., and M. P. Heinicke. 2007. Molecular phylogeny and biogeography of West Indian frogs of the genus Leptodactylus (Anura, Leptodactylidae). Mol. Phylogenet. Evol. 44: 308 – 314.en_US
dc.identifier.citedreferenceHeinen, J. L., M. W. Coco, M. S. Marcuard, D. N. White, M. N. Peterson, R. A. Martin, and R. B. Langerhans. 2013. Environmental drivers of demographics, habitat use, and behavior during a post‐Pleistocene radiation of Bahamas mosquitofish ( Gambusia hubbsi ). Evol. Ecol. 27: 971 – 991.en_US
dc.identifier.citedreferenceHenderson, R. W., and R. Powell. 1999. West Indian herpetoecology. In Caribbean amphibians and reptiles. Academic Press, San Diego, California, pp. 223 – 268.en_US
dc.identifier.citedreferenceHohenlohe, P. A., S. Bassham, P. D. Etter, N. Stiffler, E. A. Johnson, and W. A. Cresko. 2010. Population genomics of parallel adaptation in threespine stickleback using sequenced RAD tags. PLoS Genet. 6: e1000862.en_US
dc.identifier.citedreferenceHuang, H., and L. L. Knowles. 2014. Unforeseen consequences of excluding missing data from next‐generation sequences: simulation study of RAD sequences. Syst. Biol.en_US
dc.identifier.citedreferenceHubbard, D. K., R. B. Burke, I. P. Gill, W. R. Ramirez, and C. Sherman. 2008. Coral‐reef geology: Puerto Rico and the US Virgin islands. Pp. 263 – 302 in B.M. Riegl and R.E. Dodge eds. Coral Reefs of the USA. Springer, USA.en_US
dc.identifier.citedreferenceIturralde‐Vinent, M., and R. D. MacPhee. 1999. Paleogeography of the Caribbean region: implications for Cenozoic biogeography. Bull. AMNH 238: 1 – 95en_US
dc.identifier.citedreferenceJakobsson, M., and N. A. Rosenberg. 2007. CLUMPP: a cluster matching and permutation program for dealing with label switching and multimodality in analysis of population structure. Bioinformatics 23: 1801 – 1806.en_US
dc.identifier.citedreferenceJordan, S., C. Simon, D. Foote, and R. A. Englund. 2005. Phylogeographic patterns of Hawaiian Megalagrion damselflies ( Odonata: Coenagrionidae ) correlate with Pleistocene island boundaries. Mol. Ecol. 14: 3457 – 3470.en_US
dc.identifier.citedreferenceKeightley, P. D., U. Trivedi, M. Thomson, F. Oliver, S. Kumar, and M. Blaxter. 2009. Analysis of the genome sequences of three Drosophila melanogaster spontaneous mutation accumulation lines. Genome Res. 19: 1195 – 1201.en_US
dc.identifier.citedreferenceKierepka, E. M., and E. K. Latch. 2014. Performance of partial statistics in individual‐based landscape genetics. Mol. Ecol. Res. 15: 512 – 525. doi: 10.1111/1755-0998.12332.en_US
dc.identifier.citedreferenceKisel, Y., and T. G. Barraclough. 2010. Speciation has a spatial scale that depends on levels of gene flow. Am. Nat. 175: 316 – 334.en_US
dc.identifier.citedreferenceLangerhans, R. B., M. E. Gifford, and E. O. Joseph. 2007. Ecological speciation in Gambusia fishes. Evolution 61: 2056 – 2074.en_US
dc.identifier.citedreferenceLee, C. R., and T. Mitchell‐Olds. 2011. Quantifying effects of environmental and geographical factors on patterns of genetic differentiation. Mol. Ecol. 20: 4631 – 4642.en_US
dc.identifier.citedreferenceLegendre, P., and M. J. Anderson. 1999. Distance‐based redundancy analysis: testing multispecies responses in multifactorial ecological experiments. Ecol. Monogr. 69: 1 – 24.en_US
dc.identifier.citedreferenceLegendre, P., and M. J. Fortin. 2010. Comparison of the Mantel test and alternative approaches for detecting complex multivariate relationships in the spatial analysis of genetic data. Mol. Ecol. Res. 10: 831 – 844.en_US
dc.identifier.citedreferenceLosos, J. B., T. R. Jackman, A. Larson, K. D. Queiroz, and L. Rodriguez‐Schettino. 1998. Contingency and determinism in replicated adaptive radiations of island lizards. Science 279: 2115 – 2118.en_US
dc.identifier.citedreferenceLosos, J. B., and R. E. Ricklefs. 2009. Adaptation and diversification on islands. Nature 457: 830 – 836.en_US
dc.identifier.citedreferenceLosos, J. B., and D. Schluter. 2000. Analysis of an evolutionary species‐area relationship. Nature 408: 847 – 850.en_US
dc.identifier.citedreferenceMartin, C. H., and L. C. Feinstein. 2014. Novel trophic niches drive variable progress towards ecological speciation within an adaptive radiation of pupfishes. Mol. Ecol. 23: 1846 – 1862.en_US
dc.identifier.citedreferenceMassatti, R., and L. L. Knowles. 2014. Microhabitat differences impact phylogeographic concordance of codistributed species: genomic evidence in montane sedges (Carex L.) from the Rocky Mountains. Evolution 68: 2833 – 2846.en_US
dc.identifier.citedreferenceMeirmans, P. G., and P. H. Van Tienderen. 2004. GENOTYPE and GENODIVE: two programs for the analysis of genetic diversity of asexual organisms. Mol. Ecol. Notes 4: 792 – 794.en_US
dc.identifier.citedreferenceOaks, J. R., J. Sukumaran, J. A. Esselstyn, C. W. Linkem, C. D. Siler, M. T. Holder, and R. M. Brown. 2013. Evidence for climate‐driven diversification? A caution for interpreting ABC inferences of simultaneous historical events. Evolution 67: 991 – 1010.en_US
dc.identifier.citedreferenceOksanen, J., F. G. Blanchet, R. Kindt, P. Legendre, P. R. Minchin, B. O'Hara, G. L. Simpson, P. Solymos, M. H. H. Stevens, and H. Wagner. 2013. Vegan: community ecology package. R Package Version 2.0 – 9.en_US
dc.identifier.citedreferenceOneal, E., and L. L. Knowles. 2013. Ecological selection as the cause and sexual differentiation as the consequence of species divergence ? Proc. R. Soc. Lond. B Biol. Sci. 280: 20122236.en_US
dc.identifier.citedreferenceOneal, E., D. Otte, and L. L. Knowles. 2010. Testing for biogeographic mechanisms promoting divergence in Caribbean crickets (genus: Amphiacusta ). J. Biogeogr. 37: 530 – 540.en_US
dc.identifier.citedreferenceOtte, D., and D. Perez‐Gelabert 2009. Crickets of the Caribbean. Publications on orthopteran diversity, The Orthopterists Society, Ann Arbor, MI, 792 p.en_US
dc.identifier.citedreferenceParchman, T. L., Z. Gompert, J. Mudge, F. D. Schilkey, C. W. Benkman, and C. Buerkle. 2012. Genome‐wide association genetics of an adaptive trait in lodgepole pine. Mol. Ecol. 21: 2991 – 3005.en_US
dc.identifier.citedreferenceParent, C. E., and B. J. Crespi. 2006. Sequential colonization and diversification of Galapagos endemic land snail genus Bulimulus (Gastropoda, Stylommatophora). Evolution 60: 2311 – 2328.en_US
dc.identifier.citedreferenceParks, D. H., M. Porter, S. Churcher, S. Wang, C. Blouin, J. Whalley, S. Brooks, and R. G. Beiko. 2009. GenGIS: a geospatial information system for genomic data. Genome Res. 19: 1896 – 1904.en_US
dc.identifier.citedreferencePeterson, B. K., J. N. Weber, E. H. Kay, H. S. Fisher, and H. E. Hoekstra. 2012. Double digest RADseq: an inexpensive method for de novo SNP discovery and genotyping in model and non‐model species. PloS One 7: e37135.en_US
dc.identifier.citedreferencePregill, G. K., and S. L. Olson. 1981. Zoogeography of West Indian vertebrates in relation to Pleistocene climatic cycles. Annu. Rev. Ecol. Syst.: 75 – 98.en_US
dc.identifier.citedreferencePritchard, J. K., M. Stephens, and P. Donnelly. 2000. Inference of population structure using multilocus genotype data. Genetics 155: 945 – 959.en_US
dc.identifier.citedreferencePurcell, S., B. Neale, K. Todd‐Brown, L. Thomas, M. Ferreira, D. Bender, J. Maller, P. Sklar, P. de Bakker, M. Daly et al. 2007. PLINK: a toolset for whole‐genome association and population‐based linkage analysis. Am. J. Hum. Genet. 81: 559 – 575.en_US
dc.identifier.citedreferenceReitzel, A., S. Herrera, M. Layden, M. Martindale, and T. Shank. 2013. Going where traditional markers have not gone before: utility of and promise for RAD sequencing in marine invertebrate phylogeography and population genomics. Mol. Ecol. 22: 2953 – 2970.en_US
dc.identifier.citedreferenceReynolds, R. G., M. L. Niemiller, S. B. Hedges, A. Dornburg, A. R. Puente‐Rolon, and L. J. Revell. 2013. Molecular phylogeny and historical biogeography of West Indian boid snakes ( Chilabothrus ). Mol. Phylogenet. Evol. 68: 461 – 470.en_US
dc.identifier.citedreferenceRicklefs, R. E., and E. Bermingham. 2004. History and the species‐area relationship in Lesser Antillean birds. Am. Nat. 163: 227 – 239.en_US
dc.identifier.citedreferenceRicklefs, R. E., and E. Bermingham. 2007. The causes of evolutionary radiations in archipelagoes: passerine birds in the Lesser Antilles. Am. Nat. 169: 285 – 297.en_US
dc.identifier.citedreferenceRijsdijk, K. F., T. Hengl, S. J. Norder, R. Otto, B. C. Emerson, S. P. Ávila, H. López, E. E. van Loon, E. Tjørve, J. M. Fernández‐Palacios et al. 2014. Quantifying surface‐area changes of volcanic islands driven by Pleistocene sea‐level cycles: biogeographical implications for the Macaronesian archipelagos. J. Biogeogr. 41: 1242 – 1254.en_US
dc.identifier.citedreferenceRoberts, T. E. 2006. Multiple levels of allopatric divergence in the endemic Philippine fruit bat Haplonycteris fischeri (Pteropodidae). Biol. J. Linn. Soc. 88: 329 – 349.en_US
dc.identifier.citedreferenceRosenberg, N. A. 2004. DISTRUCT: a program for the graphical display of population structure. Mol. Ecol. Notes 4: 137 – 138.en_US
dc.identifier.citedreferenceRyan, P. G., P. Bloomer, C. L. Moloney, T. J. Grant, and W. Delport. 2007. Ecological speciation in South Atlantic island finches. Science 315: 1420 – 1423.en_US
dc.identifier.citedreferenceSalvi, D., P. J. Schembri, A. Sciberras, and D. J. Harris. 2014. Evolutionary history of the Maltese wall lizard Podarcis filfolensis: insights on the ‘Expansion‐Contraction’ model of Pleistocene biogeography. Mol. Ecol. 23: 1167 – 1187.en_US
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