Depicting a protein's two faces: GPCR classification by phylogenetic tree‐based HMMs
dc.contributor.author | Qian, Bin | en_US |
dc.contributor.author | Soyer, Orkun S. | en_US |
dc.contributor.author | Neubig, Richard R. | en_US |
dc.contributor.author | Goldstein, Richard A. | en_US |
dc.date.accessioned | 2016-01-04T20:52:09Z | |
dc.date.available | 2016-01-04T20:52:09Z | |
dc.date.issued | 2003-11-06 | en_US |
dc.identifier.citation | Qian, Bin; Soyer, Orkun S.; Neubig, Richard R.; Goldstein, Richard A. (2003). "Depicting a protein's two faces: GPCR classification by phylogenetic tree‐based HMMs." FEBS Letters 554(1-2): 95-99. | en_US |
dc.identifier.issn | 0014-5793 | en_US |
dc.identifier.issn | 1873-3468 | en_US |
dc.identifier.uri | https://hdl.handle.net/2027.42/116379 | |
dc.publisher | Wiley Periodicals, Inc. | en_US |
dc.subject.other | Phylogenetic analysis | en_US |
dc.subject.other | Multiple sequence analysis | en_US |
dc.subject.other | Ligand binding | en_US |
dc.subject.other | Protein coupling | en_US |
dc.subject.other | Signalling pathway | en_US |
dc.subject.other | G protein | en_US |
dc.title | Depicting a protein's two faces: GPCR classification by phylogenetic tree‐based HMMs | en_US |
dc.type | Article | en_US |
dc.rights.robots | IndexNoFollow | en_US |
dc.subject.hlbsecondlevel | Biological Chemistry | en_US |
dc.subject.hlbtoplevel | Science | en_US |
dc.description.peerreviewed | Peer Reviewed | en_US |
dc.contributor.affiliationum | Biophysics Research Division, University of Michigan, Ann Arbor, MI 48105, USA | en_US |
dc.contributor.affiliationum | Department of Chemistry, University of Michigan, Ann Arbor, MI 48105, USA | en_US |
dc.contributor.affiliationum | Department of Pharmacology, University of Michigan, Ann Arbor, MI 48105, USA | en_US |
dc.contributor.affiliationother | Division of Mathematical Biology, National Institute for Molecular Biology, The Ridgeway, Mill Hill NW7 1AA, UK | en_US |
dc.description.bitstreamurl | http://deepblue.lib.umich.edu/bitstream/2027.42/116379/1/feb2s0014579303011128.pdf | |
dc.identifier.doi | 10.1016/S0014-5793(03)01112-8 | en_US |
dc.identifier.source | FEBS Letters | en_US |
dc.identifier.citedreference | Alexander, S., Peters, J. and Mathie, A. (2001) Trends Pharmacol. Sci., Nomenclature Supplement, 12th edn. | en_US |
dc.identifier.citedreference | T.K. Attwood, M.D. Croning, A. Gaulton, Protein Eng., 15,( 2002 ), 7 – 12. | en_US |
dc.identifier.citedreference | F. Daeyaert, H. Moereels, P.J. Lewi, Comput. Methods Programs Biomed., 56,( 1998 ), 221 – 233. | en_US |
dc.identifier.citedreference | F. Horn, E.M. van der Wenden, L. Oliveira, A.P. Izerman, G. Vriend, Proteins, 41,( 2000 ), 448 – 459. | en_US |
dc.identifier.citedreference | S. Moller, J. Vilo, M.D.R. Croning, Bioinformatics, 17,( 2001 ), 1 – 8. | en_US |
dc.identifier.citedreference | J. Cao, R. Panetta, S. Yue, A. Steyaert, M. Young-Bellido, S. Ahmad, Bioinformatics, 19,( 2003 ), 234 – 240. | en_US |
dc.identifier.citedreference | B. Qian, R.A. Goldstein, Proteins, 52,( 2003 ), 446 – 453. | en_US |
dc.identifier.citedreference | J. Park, K. Karplus, C. Barrett, R. Hughey, D. Haussler, T. Hubbard, C. Chothia, J. Mol. Biol., 284,( 1998 ), 1201 – 1210. | en_US |
dc.identifier.citedreference | K. Sjolander, K. Karplus, M. Brown, R. Hughey, A. Krogh, I.S. Mian, D. Haussler, Comput. Appl. Biosci., 12,( 1996 ), 327 – 345. | en_US |
dc.identifier.citedreference | G. Mitchison, R. Durbin, J. Mol. Evol., 41,( 1995 ), 1139 – 1151. | en_US |
dc.identifier.citedreference | G. Mitchison, J. Mol. Evol., 49,( 1999 ), 11 – 22. | en_US |
dc.identifier.citedreference | Durbin, R., Eddy, S.R., Krogh, A. and Mitchison, G.J. (Eds.) (1998) Biological Sequence Analysis: Probabilistic Models of Proteins and Amino Acids, Cambridge University Press, Cambridge. | en_US |
dc.identifier.citedreference | J. Sun, J.A. Ember, T.H. Chao, Y. Fukuoka, R.D. Ye, T.E. Hugli, Protein Sci., 8,( 1998 ), 2304 – 2311. | en_US |
dc.identifier.citedreference | K. Karplus, C. Barrett, R. Hughey, Bioinformatics, 14,( 1998 ), 846 – 856. | en_US |
dc.identifier.citedreference | C. Notredame, D. Higgins, J. Heringa, J. Mol. Biol., 302,( 2000 ), 205 – 217. | en_US |
dc.identifier.citedreference | Yang, Z. (2002) Phylogenetic Analysis by Maximum Likelihood (PAML), version 3.12, http://abacus.gene.ucl.ac.uk/software/paml.html, March. | en_US |
dc.identifier.citedreference | J.M. Koshi, R.A. Goldstein, J. Mol. Evol., 42,( 1996 ), 413 – 420. | en_US |
dc.identifier.citedreference | A. Krogh, B. Larsson, G. von Heijne, E.L.L. Sonnhammer, J. Mol. Biol., 305,( 2001 ), 567 – 580. | en_US |
dc.identifier.citedreference | A. Bairoch, R. Apweiler, Nucleic Acids Res., 28,( 2000 ), 45 – 48. | en_US |
dc.identifier.citedreference | J. Wess, Pharmacol. Ther., 80,( 1998 ), 231 – 264. | en_US |
dc.identifier.citedreference | N. Blin, J. Yun, J. Wess, J. Biol. Chem., 270,( 1995 ), 17741 – 17748. | en_US |
dc.identifier.citedreference | J.A. Eisen, Genome Res., 8,( 1998 ), 163 – 167. | en_US |
dc.identifier.citedreference | J.D. Thompson, D.G. Higgins, T.J. Gibson, Nucleic Acids Res., 22,( 1994 ), 4673 – 4680. | en_US |
dc.identifier.citedreference | S. Kumar, K. Tamura, I.B. Jakobsen, M. Nei, Bioinformatics, 17,( 2001 ), 1244 – 1245. | en_US |
dc.identifier.citedreference | IPI (2003) The International Protein Index, http://www.ebi.ac.uk/IPI/, Feburary. | en_US |
dc.identifier.citedreference | Watson, S. and Arkinstall, S. (1994) G Protein Linked Receptor Facts Book, Academic Press, New York. | en_US |
dc.identifier.citedreference | Webb, A.R. (2002) Statistical Pattern Recognition, 2nd edn., John Wiley and Sons, Chichester. | en_US |
dc.identifier.citedreference | T. Iiri, Z. Farfel, H.R. Bourne, Nature, 394,( 1998 ), 35 – 38. | en_US |
dc.identifier.citedreference | F. Horn, M. Mokrane, M.W. Beukers, S. Horsch, A. Bairoch, W. Chen, O. Edvardsen, F. Campagne, G. Vriend, Nucleic Acids Res., 26,( 1998 ), 277 – 281. | en_US |
dc.identifier.citedreference | K. Palczewski, T. Kumasaka, T. Hori, C.A. Behnke, H. Motoshima, B.A. Fox, I.L. Trong, D.C. Teller, T. Okada, R.E. Stenkamp, M. Yamamoto, M. Miyano, Science, 2000,( 2000 ), 739 – 745. | en_US |
dc.identifier.citedreference | M.I. Simon, M.P. Strathmann, N. Gautam, Science, 252,( 1991 ), 802 – 808. | en_US |
dc.identifier.citedreference | R. Karchin, K. Karplus, D. Haussler, Bioinformatics, 18,( 2002 ), 147 – 159. | en_US |
dc.identifier.citedreference | M. Lapinsh, A. Gutcaits, P. Prusis, C. Post, T. Lundstedt, J.E. Wikberg, Protein Sci., 11,( 2002 ), 795 – 805. | en_US |
dc.identifier.citedreference | T.K. Attwood, P. Bradley, D.R. Flower, A. Gaulton, N. Maudling, A.L. Mitchell, G. Moulton, A. Nordle, K. Paine, P. Taylor, A. Uddin, C. Zygouri, Nucleic Acids Res., 31,( 2003 ), 400 – 402. | en_US |
dc.owningcollname | Interdisciplinary and Peer-Reviewed |
Files in this item
Remediation of Harmful Language
The University of Michigan Library aims to describe library materials in a way that respects the people and communities who create, use, and are represented in our collections. Report harmful or offensive language in catalog records, finding aids, or elsewhere in our collections anonymously through our metadata feedback form. More information at Remediation of Harmful Language.
Accessibility
If you are unable to use this file in its current format, please select the Contact Us link and we can modify it to make it more accessible to you.