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Genome evolution and host‐microbiome shifts correspond with intraspecific niche divergence within harmful algal bloom‐forming Microcystis aeruginosa
dc.contributor.authorJackrel, Sara L.
dc.contributor.authorWhite, Jeffrey D.
dc.contributor.authorEvans, Jacob T.
dc.contributor.authorBuffin, Kyle
dc.contributor.authorHayden, Kristen
dc.contributor.authorSarnelle, Orlando
dc.contributor.authorDenef, Vincent J.
dc.date.accessioned2019-10-30T15:30:33Z
dc.date.availableWITHHELD_12_MONTHS
dc.date.available2019-10-30T15:30:33Z
dc.date.issued2019-09
dc.identifier.citationJackrel, Sara L.; White, Jeffrey D.; Evans, Jacob T.; Buffin, Kyle; Hayden, Kristen; Sarnelle, Orlando; Denef, Vincent J. (2019). "Genome evolution and host‐microbiome shifts correspond with intraspecific niche divergence within harmful algal bloom‐forming Microcystis aeruginosa." Molecular Ecology 28(17): 3994-4011.
dc.identifier.issn0962-1083
dc.identifier.issn1365-294X
dc.identifier.urihttps://hdl.handle.net/2027.42/151861
dc.description.abstractIntraspecific niche divergence is an important driver of species range, population abundance and impacts on ecosystem functions. Genetic changes are the primary focus when studying intraspecific divergence; however, the role of ecological interactions, particularly host‐microbiome symbioses, is receiving increased attention. The relative importance of these evolutionary and ecological mechanisms has seen only limited evaluation. To address this question, we used Microcystis aeruginosa, the globally distributed cyanobacterium that dominates freshwater harmful algal blooms. These blooms have been increasing in occurrence and intensity worldwide, causing major economic and ecological damages. We evaluated 46 isolates of M. aeruginosa and their microbiomes, collected from 14 lakes in Michigan, USA, that vary over 20‐fold in phosphorus levels, the primary limiting nutrient in freshwater systems. Genomes of M. aeruginosa diverged along this phosphorus gradient in genomic architecture and protein functions. Fitness in low‐phosphorus lakes corresponded with additional shifts within M. aeruginosa including genome‐wide reductions in nitrogen use, an expansion of phosphorus assimilation genes and an alternative life history strategy of nonclonal colony formation. In addition to host shifts, despite culturing in common‐garden conditions, host‐microbiomes diverged along the gradient in taxonomy, but converged in function with evidence of metabolic interdependence between the host and its microbiome. Divergence corresponded with a physiological trade‐off between fitness in low‐phosphorus environments and growth rate in phosphorus‐rich conditions. Co‐occurrence of genotypes adapted to different nutrient environments in phosphorus‐rich lakes may have critical implications for understanding how M. aeruginosa blooms persist after initial nutrient depletion. Ultimately, we demonstrate that the intertwined effects of genome evolution, host life history strategy and ecological interactions between a host and its microbiome correspond with an intraspecific niche shift with important implications for whole ecosystem function.
dc.publisherWiley Periodicals, Inc.
dc.publisherCambridge University Press
dc.subject.otheradaptation
dc.subject.othercyanobacterial harmful algal blooms
dc.subject.othergenome evolution
dc.subject.otherhost‐microbiome
dc.subject.otherintraspecific variation
dc.subject.othernutrient limitation
dc.titleGenome evolution and host‐microbiome shifts correspond with intraspecific niche divergence within harmful algal bloom‐forming Microcystis aeruginosa
dc.typeArticle
dc.rights.robotsIndexNoFollow
dc.subject.hlbsecondlevelEcology and Evolutionary Biology
dc.subject.hlbtoplevelScience
dc.description.peerreviewedPeer Reviewed
dc.description.bitstreamurlhttps://deepblue.lib.umich.edu/bitstream/2027.42/151861/1/mec15198_am.pdf
dc.description.bitstreamurlhttps://deepblue.lib.umich.edu/bitstream/2027.42/151861/2/mec15198.pdf
dc.description.bitstreamurlhttps://deepblue.lib.umich.edu/bitstream/2027.42/151861/3/mec15198-sup-0001-Supinfo.pdf
dc.identifier.doi10.1111/mec.15198
dc.identifier.sourceMolecular Ecology
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