Mapping Development of the Human Intestinal Niche at Single-Cell Resolution
dc.contributor.author | Holloway, Emily M | |
dc.contributor.author | Czerwinski, Michael | |
dc.contributor.author | Tsai, Yu-Hwai | |
dc.contributor.author | Wu, Joshua H | |
dc.contributor.author | Wu, Angeline | |
dc.contributor.author | Childs, Charlie J | |
dc.contributor.author | Walton, Katherine D | |
dc.contributor.author | Sweet, Caden W | |
dc.contributor.author | Yu, Qianhui | |
dc.contributor.author | Glass, Ian | |
dc.contributor.author | Treutlein, Barbara | |
dc.contributor.author | Camp, Gray | |
dc.contributor.author | Spence, Jason R | |
dc.coverage.spatial | United States | |
dc.date.accessioned | 2023-01-09T17:23:13Z | |
dc.date.available | 2023-01-09T17:23:13Z | |
dc.date.issued | 2021-03-04 | |
dc.identifier.issn | 1934-5909 | |
dc.identifier.issn | 1875-9777 | |
dc.identifier.uri | https://www.ncbi.nlm.nih.gov/pubmed/33278341 | |
dc.identifier.uri | https://hdl.handle.net/2027.42/175362 | en |
dc.description.abstract | The human intestinal stem cell niche supports self-renewal and epithelial function, but little is known about its development. We used single-cell mRNA sequencing with in situ validation approaches to interrogate human intestinal development from 7–21 weeks post conception, assigning molecular identities and spatial locations to cells and factors that comprise the niche. Smooth muscle cells of the muscularis mucosa, in close proximity to proliferative crypts, are a source of WNT and RSPONDIN ligands, whereas EGF is expressed far from crypts in the villus epithelium. Instead, an PDGFRAHI/F3HI/DLL1HI mesenchymal population lines the crypt-villus axis and is the source of the epidermal growth factor (EGF) family member NEUREGULIN1 (NRG1). In developing intestine enteroid cultures, NRG1, but not EGF, permitted increased cellular diversity via differentiation of secretory lineages. This work highlights the complexities of intestinal EGF/ERBB signaling and delineates key niche cells and signals of the developing intestine. Holloway, Czerwinski, Tsai et al. used scRNA-seq to characterize the cellular diversity of the developing human intestinal stem cell niche. Transcriptional and spatial profiling demonstrated that Neuregulin 1 (NRG1) is expressed by PGDFRAHI/F3HI/DLL1HI subepithelial mesenchyme and that NRG1, but not EGF, permitted secretory lineage differentiation in enteroid culture. | |
dc.format.medium | Print-Electronic | |
dc.language | eng | |
dc.publisher | Elsevier | |
dc.subject | NRG1 | |
dc.subject | development | |
dc.subject | enteroid | |
dc.subject | human | |
dc.subject | intestine | |
dc.subject | niche | |
dc.subject | organoid | |
dc.subject | scRNA-seq | |
dc.subject | stem cell | |
dc.subject | Cell Differentiation | |
dc.subject | Humans | |
dc.subject | Intestinal Mucosa | |
dc.subject | Intestines | |
dc.subject | Stem Cell Niche | |
dc.subject | Stem Cells | |
dc.title | Mapping Development of the Human Intestinal Niche at Single-Cell Resolution | |
dc.type | Article | |
dc.identifier.pmid | 33278341 | |
dc.description.bitstreamurl | http://deepblue.lib.umich.edu/bitstream/2027.42/175362/2/Holloway.pdf | |
dc.identifier.doi | 10.1016/j.stem.2020.11.008 | |
dc.identifier.doi | https://dx.doi.org/10.7302/6743 | |
dc.identifier.source | Cell Stem Cell | |
dc.description.version | Published version | |
dc.date.updated | 2023-01-09T17:22:44Z | |
dc.identifier.orcid | 0000-0001-7869-3992 | |
dc.description.filedescription | Description of Holloway.pdf : Published version | |
dc.identifier.volume | 28 | |
dc.identifier.issue | 3 | |
dc.identifier.startpage | 568 | |
dc.identifier.endpage | 580 | |
dc.identifier.name-orcid | Holloway, Emily M | |
dc.identifier.name-orcid | Czerwinski, Michael | |
dc.identifier.name-orcid | Tsai, Yu-Hwai | |
dc.identifier.name-orcid | Wu, Joshua H | |
dc.identifier.name-orcid | Wu, Angeline | |
dc.identifier.name-orcid | Childs, Charlie J | |
dc.identifier.name-orcid | Walton, Katherine D | |
dc.identifier.name-orcid | Sweet, Caden W | |
dc.identifier.name-orcid | Yu, Qianhui | |
dc.identifier.name-orcid | Glass, Ian | |
dc.identifier.name-orcid | Treutlein, Barbara | |
dc.identifier.name-orcid | Camp, Gray | |
dc.identifier.name-orcid | Spence, Jason R; 0000-0001-7869-3992 | |
dc.working.doi | 10.7302/6743 | en |
dc.owningcollname | Internal Medicine, Department of |
Files in this item
Remediation of Harmful Language
The University of Michigan Library aims to describe library materials in a way that respects the people and communities who create, use, and are represented in our collections. Report harmful or offensive language in catalog records, finding aids, or elsewhere in our collections anonymously through our metadata feedback form. More information at Remediation of Harmful Language.
Accessibility
If you are unable to use this file in its current format, please select the Contact Us link and we can modify it to make it more accessible to you.