View Item 

Show simple item record

The operator-early promoter regions of Shiga-toxin bearing phage H-19B
dc.contributor.authorShi, Tingen_US
dc.contributor.authorFriedman, David I.en_US
dc.date.accessioned2010-06-01T21:11:30Z
dc.date.available2010-06-01T21:11:30Z
dc.date.issued2001-08en_US
dc.identifier.citationShi, Ting; Friedman, David I. (2001). "The operator-early promoter regions of Shiga-toxin bearing phage H-19B." Molecular Microbiology 41(3): 585-599. <http://hdl.handle.net/2027.42/74272>en_US
dc.identifier.issn0950-382Xen_US
dc.identifier.issn1365-2958en_US
dc.identifier.urihttps://hdl.handle.net/2027.42/74272
dc.identifier.urihttp://www.ncbi.nlm.nih.gov/sites/entrez?cmd=retrieve&db=pubmed&list_uids=11532127&dopt=citationen_US
dc.format.extent2642619 bytes
dc.format.extent3109 bytes
dc.format.mimetypeapplication/pdf
dc.format.mimetypetext/plain
dc.publisherBlackwell Science Ltden_US
dc.rightsBlackwell Science Ltden_US
dc.titleThe operator-early promoter regions of Shiga-toxin bearing phage H-19Ben_US
dc.typeArticleen_US
dc.subject.hlbsecondlevelMicrobiology and Immunologyen_US
dc.subject.hlbtoplevelScienceen_US
dc.description.peerreviewedPeer Revieweden_US
dc.contributor.affiliationumDepartment of Microbiology and Immunology, University of Michigan, Ann Arbor, MI 48109, USA.en_US
dc.identifier.pmid11532127en_US
dc.description.bitstreamurlhttp://deepblue.lib.umich.edu/bitstream/2027.42/74272/1/j.1365-2958.2001.02507.x.pdf
dc.identifier.doi10.1046/j.1365-2958.2001.02507.xen_US
dc.identifier.sourceMolecular Microbiologyen_US
dc.identifier.citedreferenceAcheson, W.K., Donohue-Rolfe, A., Keusch, G.T. ( 1991 ) The family of Shiga and Shiga-like toxins. In: Sourcebook of Bacterial Protein Toxins. Alouf, J.E., and Freer, J.H. (eds). London: Academic Press, pp. 415 – 433en_US
dc.identifier.citedreferenceAstromoff, A & Ptashne, M. ( 1995 ) A variant of lambda repressor with an altered pattern of cooperative binding to DNA sites. Proc Natl Acad Sci USA 92: 8110 – 8114en_US
dc.identifier.citedreferenceBushman, F.D. ( 1993 ) The bacteriophage 434 right operator roles of O R 1, O R 2 and O R 3. J Mol Biol 230: 28 – 40en_US
dc.identifier.citedreferenceCam, K.M., Oberto, J., Weisberg, R.A. ( 1991 ) The early promoters of bacteriophage HK022: contrasts and similarities to other lambdoid phages. J Bacteriol 173: 734 – 740en_US
dc.identifier.citedreferenceCampbell, A. ( 1988 ) Phage evolution and speciation. In the Bacteriophages 1. Calendar, R., (ed.) New York: Plenum Press, pp. 1 – 14en_US
dc.identifier.citedreferenceCarlson, N.G. & Little, J.W. ( 1993a ) Highly cooperative DNA binding by the coliphage HK022 repressor. J Mol Biol 230: 1108 – 1130en_US
dc.identifier.citedreferenceCarlson, N.G & Little, J.W. ( 1993b ) A novel antivirulence element in the temperate bacteriophage HK022. J Bacteriol 175: 7541 – 7549en_US
dc.identifier.citedreferenceCourt, D. & Sato, K. ( 1969 ) Studies of novel transducing variants of lambda: dispensability of genes N and Q. Virology 39: 348 – 352en_US
dc.identifier.citedreferenceCrawford, J.A., Kaper, J.B., DiRita, V.J. ( 1998 ) Analysis of ToxR-dependent transcription activation of ompU, the gene encoding a major envelope protein in Vibrio cholerae. Mol Microbiol 29: 235 – 246en_US
dc.identifier.citedreferenceFlashman, S.M. ( 1978 ) Mutational analysis of the operators of bacteriophage lambda. Mol Gen Genet 166: 61 – 73en_US
dc.identifier.citedreferenceFong, R.S., Woody, S., Gussin, G.N. ( 1993 ) Modulation of P (RM) activity by the lambda pR promoter in both the presence and absence of repressor. J Mol Biol 232: 792 – 804en_US
dc.identifier.citedreferenceFowler, R.G., Degnen, G.E., Cox, E.C. ( 1974 ) Mutational specificity of a conditional Escherichia coli mutator, mutD5. Mol Gen Genet 133: 179 – 191en_US
dc.identifier.citedreferenceFriedman, D.I., Olson, E.J., Carver, D., Gellert, M. ( 1984 ) Synergistic effect of himA and gyrB mutations: evidence that him functions control expression of ilv and xyl genes. J Bacteriol 157: 484 – 489en_US
dc.identifier.citedreferenceGussin, G.N., Johnson, A.D., Pabo, C.O., Sauer, R.T. ( 1983 ) Repressor and Cro protein: structure, function, and role in lysogenization. In Lambda II. Hendrix, R.W., Roberts, J.W., Stahl, F.W., and Weisberg, R.A. (eds). Cold Spring Harbor, NY: Cold Spring Harbor Press, pp. 93 – 121en_US
dc.identifier.citedreferenceHershberger, P.A. & deHaseth, P.L. ( 1991 ) RNA polymerase bound to the pR promoter of bacteriophage lambda inhibits open complex formation at the divergently transcribed PRM promoter. Implications for an indirect mechanism of transcriptional activation by lambda repressor. J Mol Biol 222: 479 – 494en_US
dc.identifier.citedreferenceHochschild, A., Irwin, N., Ptashne, M. ( 1983 ) Repressor structure and the mechanism of positive control. Cell 32: 319 – 325en_US
dc.identifier.citedreferenceHopkins, N. & Ptashne, M. ( 1971 ) Genetics of virulence. In The Bacteriophage Lambda. Hershey, A.D., (ed.). Cold Spring Harbor, NY: Cold Spring Harbor Laboratory, pp. 571 – 574.en_US
dc.identifier.citedreferenceHorton, R.M., Cai, Z.L., Ho, S.N., Pease, L.R. ( 1990 ) Gene splicing by overlap extension: tailor-made genes using the polymerase chain reaction. Biotechniques 8: 528 – 535en_US
dc.identifier.citedreferenceHuang, A., Friesen, J., Brunton, J.L. ( 1987 ) Characterization of a bacteriophage that carries the genes for production of Shiga-like toxin I in Escherichia coli. J Bacteriol 169: 4308 – 4312en_US
dc.identifier.citedreferenceJacob, F. & Wollman, E.L. ( 1954 ) Etude gÉnÉtique d'un bactÉriophage tempÉrÉ d'Escherichia coli I L systÈme gÉnÉtique du bactÉriophage λ. Ann Inst Pasteur 85: 653 – 673en_US
dc.identifier.citedreferenceJohnson, A.D., Poteete, A.R., Lauer, G., Sauer, R.T., Ackers, G.K., Ptashne, M. ( 1981 ) lambda Repressor and cro – components of an efficient molecular switch. Nature 294: 217 – 223en_US
dc.identifier.citedreferenceJuhala, R.J., Ford, M.E., Duda, R.L., Youlton, A., Hatfull, G.F., Hendrix, R.W. ( 2000 ) Genomic sequences of bacteriophages HK97 and HK022: Pervasive mosaicism in the Lambdoid phages. J Mol Biol 299: 27 – 51en_US
dc.identifier.citedreferenceKaper, J.B. & O'Brien, A.D. ( 1998 ) Escherichia coli O157: H7 and Other Shiga Toxin Producing E. coli strains. Washington, DC: American Society for Microbiologyen_US
dc.identifier.citedreferenceKarch, H., Schmidt, H., Janetzki-Mittmann, C., Scheef, J., Kroger, M. ( 1999 ) Shiga toxins even when different are encoded at identical positions in the genomes of related temperate bacteriophages. Mol Gen Genet 262: 600 – 607en_US
dc.identifier.citedreferenceKimmitt, P.T., Harwood, C.R., Barer, M.R. ( 1999 ) Induction of type 2 Shiga toxin synthesis in Escherichia coli O157 by 4-quinolones. Lancet 353: 1588 – 1589en_US
dc.identifier.citedreferenceKoudelka, G.B. & Lam, C.Y. ( 1993 ) Differential recognition of OR1 and OR3 by bacteriophage 434 repressor and Cro. J Biol Chem 268: 23812 – 23817en_US
dc.identifier.citedreferenceLittle, J.W. ( 1995 ) The SOS regulatory system. In Regulation of Gene Expression in Escherichia Coli. Linn, E.C.C., and Lynch, A.S. (eds). Georgetown, TX: R.G. Landis, pp. 453 – 479en_US
dc.identifier.citedreferenceMatsushiro, A., Sato, K., Miyamoto, H., Yamamura, T., Honda, T. ( 1999 ) Induction of prophages of enterohemorrhagic Escherichia coli O157: H7 with norfloxacin. J Bacteriol 181: 2257 – 2260en_US
dc.identifier.citedreferenceMiller, H.I. & Friedman, D.I. ( 1980 ) An E. coli gene product required for lambda site-specific recombination. Cell 20: 711 – 719en_US
dc.identifier.citedreferenceMizutani, S., Nakazono, N., Sugino, Y. ( 1999 ) The so-called chromosomal verotoxin genes are actually carried by defective prophages. DNA Res 6: 141 – 143en_US
dc.identifier.citedreferenceMozola, M.A., Friedman, D.I., Crawford, C.L., Wulff, D.L., Shimatake, H., Rosenberg, M. ( 1979 ) Mutations reducing the activity of c17, a promoter of phage lambda formed by a tandem duplication. Proc Natl Acad Sci USA 76: 1122 – 1125en_US
dc.identifier.citedreferenceMurphy, K.C. ( 1998 ) Use of bacteriophage lambda recombination functions to promote gene replacement in Escherichia coli. J Bacteriol 180: 2063 – 2071en_US
dc.identifier.citedreferenceNeely, M.N. & Friedman, D.I. ( 1998a ) Arrangement and functional identification of genes in the regulatory region of lambdoid phage H-19B, a carrier of a Shiga-like toxin. Gene 223: 105 – 113en_US
dc.identifier.citedreferenceNeely, M.N. & Friedman, D.I. ( 1998b ) Functional and genetic analysis of regulatory regions of coliphage H-19B: location of shiga-like toxin and lysis genes suggest a role for phage functions in toxin release. Mol Microbiol 28: 1255 – 1267en_US
dc.identifier.citedreferenceO'Brien, A.D. & Holmes, R.K. ( 1987 ) Shiga and Shiga-like toxins. Microbiol Rev 51: 206 – 220en_US
dc.identifier.citedreferenceO'Brien, A.D. & Holmes, R.K. ( 1996 ) Protein toxins of Escherichia coli and Salmonella. In Escherichia Coli and Salmonella: Cellular and Molecular Biology. Neidhardt, F.C. (ed.). Washington, D.C: American Society for Microbiology Press, pp. 2788 – 2802en_US
dc.identifier.citedreferenceO'Brien, A.D., Newland, J.W., Miller, S.F., Holmes, R.K., Smith, H.W., Formal, S.B. ( 1984 ) Shiga-like toxin-converting phages from Escherichia coli strains that cause hemorrhagic colitis or infantile diarrhea. Science 226: 694 – 696en_US
dc.identifier.citedreferenceOgawa, T., Masukata, H., Tomizawa, J. ( 1988 ) Transcriptional regulation of early functions of bacteriophage phi 80. J Mol Biol 202: 551 – 563en_US
dc.identifier.citedreferencePlunkett, G., Rose, D.J., Durfee, T.J., Blattner, F.R. ( 1999 ) Sequence of Shiga toxin 2 phage 933W from Escherichia coli O157: H7: Shiga toxin as a phage late-gene product. J Bacteriol 181: 1767 – 1778en_US
dc.identifier.citedreferencePoteete, A.R., Ptashne, M., Ballivet, M., Eisen, H. ( 1980 ) Operator sequences of bacteriophages P22 and 21. J Mol Biol 137: 81 – 91en_US
dc.identifier.citedreferencePtashne, M. ( 1971 ) Repressor and its action. In The Bacteriophage Lambda. Hershey, A.D. (ed.). Cold Spring Harbor, NY: Cold Spring Harbor Laboratory, pp. 221 – 237en_US
dc.identifier.citedreferencePtashne, M. ( 1992 ) A Genetic Switch, 2nd Edn. Cambridge, MA: Cell Pressen_US
dc.identifier.citedreferencePtashne, M., Jeffrey, A., Johnson, A.D., Maurer, R., Meyer, B.J., Pabo, C.O., Roberts, T.M., Sauer, R.T. ( 1980 ) How the lambda repressor and cro work. Cell 19: 1 – 11en_US
dc.identifier.citedreferenceRoberts, J. ( 1992 ) Antitermination and the control of transcription elongation. In Transcription Regulation. McKnight, S.L., and Yamamoto, K.R., (eds). Cold Spring Harbor, NY: Cold Spring Harbor Laboratory, pp. 389 – 406en_US
dc.identifier.citedreferenceRoberts, J.W., Yarnell, W., Bartlett, E., Guo, J., Marr, M., Ko, D.C., Sun, H., Roberts, C.W. ( 1998 ) Antitermination by bacteriophage Lambda Q protein. Cold Spring Harbor Symposium Quant. Biol. LXIII: 319 – 325en_US
dc.identifier.citedreferenceSly, W.S., Rabideau, K., Kolber, A. ( 1971 ) The Mechanism of Lambda Virulence: II Regulatory mutations in classical virulence. In The Bacteriophage Lambda. Hershey, A.D. (ed.). Cold Spring Harbor, NY: Cold Spring Harbor Laboratory, pp. 575 – 588.en_US
dc.identifier.citedreferenceStrainic, M.G. Jr, Sullivan, J.J., Collado-Vides, J., deHaseth, P.L. ( 2000 ) Promoter interference in a bacteriophage lambda control region: effects of a range of interpromoter distances. J Bacteriol 182: 216 – 220en_US
dc.identifier.citedreferenceSusskind, M.M. & Botstein, D. ( 1978 ) Molecular genetics of bacteriophage P22. Microbiol Rev 42: 385 – 413en_US
dc.identifier.citedreferenceUnkmeir, A.anD. & Schmidt, H. ( 2000 ) Structural analysis of phage-borne stx genes and their flanking sequences in shiga toxin-producing Escherichia coli and Shigella dysenteriae type 1 strains. Infect Immun 68: 4856 – 4864en_US
dc.identifier.citedreferenceWagner, P.L., Neely, M.N., Zhang, X., Acheson, D.W.K., Waldor, M.K., Friedman, D.I. ( 2001 ) Role for a phage promoter in shiga toxin, 2 expression from a pathogenic Escherichia coli. J. Bacteriol 183: 2081 – 2085en_US
dc.identifier.citedreferenceWaldor, M.K. ( 1998 ) Bacteriophage biology and bacterial virulence. Trends Microbiol 6: 295 – 297en_US
dc.identifier.citedreferenceWeisberg, R.A., Gottesman, M.E., Hendrix, R.W., Little, J.W. ( 1999 ) Family values in the age of genomics: Comparative analysis of temperate bacteriophage HKO22. Ann Rev Genet 33: 565 – 602en_US
dc.identifier.citedreferenceWeisberg, R.A. & Landy, A. ( 1983 ) Site-specific recombination in phage Lambda. In Lambda II Hendrix, R.W., Roberts, J.W., Stahl, F.W., and Weisberg, R.A. (eds.). Cold Spring Harbor, NY: Cold Spring Harbor Laboratory, pp. 211 – 250en_US
dc.identifier.citedreferenceWharton, R.P., Brown, E.L., Ptashne, M. ( 1984 ) Substituting an alpha-helix switches the sequence–specific DNA interactions of a repressor. Cell 38: 361 – 369en_US
dc.identifier.citedreferenceXu, J. & Koudelka, G.B. ( 2000 ) Mutually exclusive utilization of P R and P RM promoters in bacteriophage 434 O R. J Bacteriol 182: 3165 – 3174en_US
dc.identifier.citedreferenceYu, D., Ellis, H.M., Lee, E.C., Jenkins, N.A., Copeland, N.G., Court, D.L. ( 2000 ) An efficient recombination system for chromosome engineering in Escherichia coli. Proc Natl Acad Sci USA 97: 5978 – 5983.en_US
dc.identifier.citedreferenceYu, R.R. & DiRita, V.J. ( 1999 ) Analysis of an autoregulatory loop controlling ToxT, cholera toxin, and toxin-coregulated pilus production in Vibrio cholerae. J Bacteriol 181: 2584 – 2592en_US
dc.identifier.citedreferenceZhang, X., McDaniel, A.D., Wolf, L.E., Keusch, G.T., Waldor, M.K., Acheson, D.W. ( 2000 ) Quinolone antibiotics induce Shiga toxin-encoding bacteriophages, toxin production, and death in mice. J Infect Dis 181: 664 – 670en_US
dc.identifier.citedreferenceZhou, Y.H., Zhang, X.P., Ebright, R.H. ( 1991 ) Random mutagenesis of gene-sized DNA molecules by use of PCR with Taq DNA polymerase. Nucleic Acids Res 19: 6052en_US
dc.owningcollnameInterdisciplinary and Peer-Reviewed


Files in this item

Name:
j.1365-2958.2001.02507.x.pdf
Size:
2.520MB
Format:
PDF
View/Open

Show simple item record

Remediation of Harmful Language

The University of Michigan Library aims to describe library materials in a way that respects the people and communities who create, use, and are represented in our collections. Report harmful or offensive language in catalog records, finding aids, or elsewhere in our collections anonymously through our metadata feedback form. More information at Remediation of Harmful Language.

Accessibility

If you are unable to use this file in its current format, please select the Contact Us link and we can modify it to make it more accessible to you.