Phylloquinone (vitamin K 1 ) biosynthesis in plants: two peroxisomal thioesterases of lactobacillales origin hydrolyze 1,4‐dihydroxy‐2‐naphthoyl‐coa
dc.contributor.author | Widhalm, Joshua R. | en_US |
dc.contributor.author | Ducluzeau, Anne‐lise | en_US |
dc.contributor.author | Buller, Nicole E. | en_US |
dc.contributor.author | Elowsky, Christian G. | en_US |
dc.contributor.author | Olsen, Laura J. | en_US |
dc.contributor.author | Basset, Gilles J. C. | en_US |
dc.date.accessioned | 2012-08-09T14:55:38Z | |
dc.date.available | 2013-09-03T15:38:27Z | en_US |
dc.date.issued | 2012-07 | en_US |
dc.identifier.citation | Widhalm, Joshua R.; Ducluzeau, Anne‐lise ; Buller, Nicole E.; Elowsky, Christian G.; Olsen, Laura J.; Basset, Gilles J. C. (2012). "Phylloquinone (vitamin K 1 ) biosynthesis in plants: two peroxisomal thioesterases of lactobacillales origin hydrolyze 1,4â dihydroxyâ 2â naphthoylâ coa." The Plant Journal 71(2). <http://hdl.handle.net/2027.42/92396> | en_US |
dc.identifier.issn | 0960-7412 | en_US |
dc.identifier.issn | 1365-313X | en_US |
dc.identifier.uri | https://hdl.handle.net/2027.42/92396 | |
dc.publisher | Wiley Periodicals, Inc. | en_US |
dc.publisher | Blackwell Publishing Ltd | en_US |
dc.subject.other | Chloroplast | en_US |
dc.subject.other | Arabidopsis | en_US |
dc.subject.other | Synechocystis | en_US |
dc.subject.other | Phylloquinone | en_US |
dc.subject.other | Peroxisome | en_US |
dc.subject.other | Hotdog‐Fold | en_US |
dc.title | Phylloquinone (vitamin K 1 ) biosynthesis in plants: two peroxisomal thioesterases of lactobacillales origin hydrolyze 1,4‐dihydroxy‐2‐naphthoyl‐coa | en_US |
dc.type | Article | en_US |
dc.rights.robots | IndexNoFollow | en_US |
dc.subject.hlbsecondlevel | Natural Resources and Environment | en_US |
dc.subject.hlbtoplevel | Science | en_US |
dc.description.peerreviewed | Peer Reviewed | en_US |
dc.contributor.affiliationum | Department of Molecular, Cellular, and Developmental Biology, University of Michigan, Ann Arbor, MI 48109, USA | en_US |
dc.contributor.affiliationother | Center for Plant Science Innovation, University of Nebraska‐Lincoln, Lincoln, NE 68588, USA | en_US |
dc.identifier.pmid | 22372525 | en_US |
dc.description.bitstreamurl | http://deepblue.lib.umich.edu/bitstream/2027.42/92396/1/TPJ_4972_sm_FigS3.pdf | |
dc.description.bitstreamurl | http://deepblue.lib.umich.edu/bitstream/2027.42/92396/2/TPJ_4972_sm_TableS1.pdf | |
dc.description.bitstreamurl | http://deepblue.lib.umich.edu/bitstream/2027.42/92396/3/TPJ_4972_sm_FigS2.pdf | |
dc.description.bitstreamurl | http://deepblue.lib.umich.edu/bitstream/2027.42/92396/4/TPJ_4972_sm_TableS4.pdf | |
dc.description.bitstreamurl | http://deepblue.lib.umich.edu/bitstream/2027.42/92396/5/TPJ_4972_sm_FigS6.pdf | |
dc.description.bitstreamurl | http://deepblue.lib.umich.edu/bitstream/2027.42/92396/6/j.1365-313X.2012.04972.x.pdf | |
dc.description.bitstreamurl | http://deepblue.lib.umich.edu/bitstream/2027.42/92396/7/TPJ_4972_sm_FigS1.pdf | |
dc.description.bitstreamurl | http://deepblue.lib.umich.edu/bitstream/2027.42/92396/8/TPJ_4972_sm_TableS3.pdf | |
dc.description.bitstreamurl | http://deepblue.lib.umich.edu/bitstream/2027.42/92396/9/TPJ_4972_sm_FigS5.pdf | |
dc.description.bitstreamurl | http://deepblue.lib.umich.edu/bitstream/2027.42/92396/10/TPJ_4972_sm_TableS2.pdf | |
dc.description.bitstreamurl | http://deepblue.lib.umich.edu/bitstream/2027.42/92396/11/TPJ_4972_sm_FigS4.pdf | |
dc.identifier.doi | 10.1111/j.1365-313X.2012.04972.x | en_US |
dc.identifier.source | The Plant Journal | en_US |
dc.identifier.citedreference | Reumann, S., Quan, S., Aung, K. et al. ( 2009 ) In‐depth proteome analysis of arabidopsis leaf peroxisomes combined with in vivo subcellular targeting verification indicates novel metabolic and regulatory functions of peroxisomes. Plant Physiol. 150, 125 – 143. | en_US |
dc.identifier.citedreference | Harrison‐Lowe, N. and Olsen, L.J. ( 2006 ) Isolation of glyoxysomes from pumpkin cotyledons. Curr Protoc Cell Biol. Chapter 3: Unit 3.19. | en_US |
dc.identifier.citedreference | Ikeda, Y., Komura, M., Watanabe, M., Minami, C., Koike, H., Itoh, S., Kashino, Y. and Satoh, K. ( 2008 ) Photosystem I complexes associated with fucoxanthin‐chlorophyll‐binding proteins from a marine centric diatom, chaetoceros gracilis. Biochim. Biophys. Acta. 1777, 351 – 361. | en_US |
dc.identifier.citedreference | Jiang, M., Chen, X., Guo, Z.F., Cao, Y., Chen, M. and Guo, Z. ( 2008 ) Identification and characterization of (1R,6R)‐2‐succinyl‐6‐hydroxy‐2,4‐cyclohexadiene‐1‐carboxylate synthase in the menaquinone biosynthesis of escherichia coli. Biochemistry, 47, 3426 – 3434. | en_US |
dc.identifier.citedreference | Kaiping, S., Soll, J. and Schultz, G. ( 1984 ) Site of methylation of 2‐phytyl‐1,4‐naphthoquinol in phylloquinone (vitamin K1) synthesis in spinach chloroplasts. Phytochemistry, 23, 89. | en_US |
dc.identifier.citedreference | Karamoko, M., Cline, S., Redding, K., Ruiz, N. and Hamel, P.P. ( 2011 ) Lumen thiol oxidoreductase1, a disulfide bond‐forming catalyst, is required for the assembly of photosystem II in Arabidopsis. Plant Cell, 23, 4462 – 4475 | en_US |
dc.identifier.citedreference | Karimi, M., Inze, D. and Depicker, A. ( 2002 ) GATEWAY vectors for agrobacterium‐mediated plant transformation. Trends Plant Sci. 7, 193 – 195. | en_US |
dc.identifier.citedreference | Kim, H.U., van Oostende, C., Basset, G.J. and Browse, J. ( 2008 ) The AAE14 gene encodes the arabidopsis o‐succinylbenzoyl‐CoA ligase that is essential for phylloquinone synthesis and photosystem‐I function. Plant J. 54, 272 – 283. | en_US |
dc.identifier.citedreference | Lohmann, A., Schottler, M.A., Brehelin, C., Kessler, F., Bock, R., Cahoon, E.B. and Dormann, P. ( 2006 ) Deficiency in phylloquinone (vitamin K1) methylation affects prenyl quinone distribution, photosystem I abundance, and anthocyanin accumulation in the arabidopsis AtmenG mutant. J. Biol. Chem. 281, 40461 – 40472. | en_US |
dc.identifier.citedreference | Oostende, C., Widhalm, J.R. and Basset, G.J. ( 2008 ) Detection and quantification of vitamin K(1) quinol in leaf tissues. Phytochemistry, 69, 2457 – 2462. | en_US |
dc.identifier.citedreference | Reumann, S. ( 2004a ) Specification of the peroxisome targeting signals type 1 and type 2 of plant peroxisomes by bioinformatics analyses. Plant Physiol. 135, 783 – 800. | en_US |
dc.identifier.citedreference | Reumann, S., Ma, C., Lemke, S. and Babujee, L. ( 2004b ) AraPerox. A database of putative arabidopsis proteins from plant peroxisomes. Plant Physiol. 136, 2587 – 2608. | en_US |
dc.identifier.citedreference | Reumann, S., Babujee, L., Ma, C., Wienkoop, S., Siemsen, T., Antonicelli, G.E., Rasche, N., Luder, F., Weckwerth, W. and Jahn, O. ( 2007 ) Proteome analysis of arabidopsis leaf peroxisomes reveals novel targeting peptides, metabolic pathways, and defense mechanisms. Plant Cell, 19, 3170 – 3193. | en_US |
dc.identifier.citedreference | Sakuragi, Y. and Bryant, D.A. ( 2006 ) Genetic manipulation of quinone biosynthesis in cyanobacteria. In Advances in Photosynthesis and Respiration. Photosystem I: The light‐Driven Plastocyanin: Ferredoxin Oxidoreductase in Photosynthesis ( Golbeck, J.H., ed.). Dordrecht, The Netherlands: Springer, pp. 205 – 222. | en_US |
dc.identifier.citedreference | Sattler, S.E., Cahoon, E.B., Coughlan, S.J. and DellaPenna, D. ( 2003 ) Characterization of tocopherol cyclases from higher plants and cyanobacteria. evolutionary implications for tocopherol synthesis and function. Plant Physiol. 132, 2184 – 2195. | en_US |
dc.identifier.citedreference | Schultz, G., Soll, J. and Ellerbrock, B.H. ( 1981 ) Site of prenylation reaction in synthesis of phylloquinone (vitamin K1) by spinach chloroplasts. Eur. J. Biochem. 117, 329 – 332. | en_US |
dc.identifier.citedreference | Sessions, A., Burke, E., Presting, G. et al. ( 2002 ) A high‐throughput arabidopsis reverse genetics system. Plant Cell, 14, 2985 – 2994. | en_US |
dc.identifier.citedreference | Shimada, H., Ohno, R., Shibata, M., Ikegami, I., Onai, K., Ohto, M.A. and Takamiya, K. ( 2005 ) Inactivation and deficiency of core proteins of photosystems I and II caused by genetical phylloquinone and plastoquinone deficiency but retained lamellar structure in a T‐DNA mutant of arabidopsis. Plant J. 41, 627 – 637. | en_US |
dc.identifier.citedreference | Sigfridsson, K., Hansson, O. and Brzezinski, P. ( 1995 ) Electrogenic light reactions in photosystem I: resolution of electron‐transfer rates between the iron‐sulfur centers. Proc. Natl Acad. Sci. USA, 92, 3458 – 3462. | en_US |
dc.identifier.citedreference | Singh, A.K., Bhattacharyya‐Pakrasi, M. and Pakrasi, H.B. ( 2008 ) Identification of an atypical membrane protein involved in the formation of protein disulfide bonds in oxygenic photosynthetic organisms. J. Biol. Chem. 283, 15762 – 15770. | en_US |
dc.identifier.citedreference | Strawn, M.A., Marr, S.K., Inoue, K., Inada, N., Zubieta, C. and Wildermuth, M.C. ( 2007 ) Arabidopsis isochorismate synthase functional in pathogen‐induced salicylate biosynthesis exhibits properties consistent with a role in diverse stress responses. J. Biol. Chem. 282, 5919 – 5933. | en_US |
dc.identifier.citedreference | Thoden, J.B., Holden, H.M., Zhuang, Z. and Dunaway‐Mariano, D. ( 2002 ) X‐ray crystallographic analyses of inhibitor and substrate complexes of wild‐type and mutant 4‐hydroxybenzoyl‐CoA thioesterase. J. Biol. Chem. 277, 27468 – 27476. | en_US |
dc.identifier.citedreference | Weigel, D. and Glazebrook, J. ( 2002 ) Arabidopsis: A laboratory manual. New York, USA: Cold Spring Harbor Laboratory Press. | en_US |
dc.identifier.citedreference | Widhalm, J.R., van Oostende, C., Furt, F. and Basset, G.J. ( 2009 ) A dedicated thioesterase of the hotdog‐fold family is required for the biosynthesis of the naphthoquinone ring of vitamin K1. Proc. Natl Acad. Sci. USA, 106, 5599 – 5603. | en_US |
dc.identifier.citedreference | Williams, J.G.K. ( 1988 ) Construction of specific mutations in photosystem II photosynthetic reaction center by genetic enginerring methods in synechocystis 6803. Methods Enzymol. 167, 766 – 778. | en_US |
dc.identifier.citedreference | Yoshida, E., Nakamura, A. and Watanabe, T. ( 2003 ) Reversed‐phase HPLC determination of chlorophyll a’ and naphthoquinones in photosystem I of red algae: existence of two menaquinone‐4 molecules in photosystem I of cyanidium caldarium. Anal. Sci. 19, 1001 – 1005. | en_US |
dc.identifier.citedreference | Yu, G., Nguyen, T.T.H., Guo, Y. et al. ( 2010 ) Enzymatic functions of wild tomato methylketone synthases 1 and 2. Plant Physiol. 154, 67 – 77. | en_US |
dc.identifier.citedreference | Babujee, L., Wurtz, V., Ma, C., Lueder, F., Soni, P., van Dorsselaer, A. and Reumann, S. ( 2010 ) The proteome map of spinach leaf peroxisomes indicates partial compartmentalization of phylloquinone (vitamin K1) biosynthesis in plant peroxisomes. J. Exp. Bot. 61, 1441 – 1453. | en_US |
dc.identifier.citedreference | Benning, M.M., Wesenberg, G., Liu, R., Taylor, K.L., Dunaway‐Mariano, D. and Holden, H.M. ( 1998 ) The three‐dimensional structure of 4‐hydroxybenzoyl‐CoA thioesterase from pseudomonas sp. strain CBS‐3. J. Biol. Chem. 273, 33572 – 33579. | en_US |
dc.identifier.citedreference | Booth, S.L. ( 2009 ) Roles for vitamin K beyond coagulation. Annu. Rev. Nutr. 29, 89 – 110. | en_US |
dc.identifier.citedreference | Booth, S.L. and Suttie, J.W. ( 1998 ) Dietary intake and adequacy of vitamin K. J. Nutr. 128, 785 – 788. | en_US |
dc.identifier.citedreference | Brettel, K., Sétif, P. and Mathis, P. ( 1986 ) Flash‐induced absorption changes in photosystem I at low temperature: evidence that the electron acceptor A1 is vitamin K1. FEBS Lett. 203, 220 – 224. | en_US |
dc.identifier.citedreference | Cantu, D.C., Chen, Y. and Reilly, P.J. ( 2010 ) Thioesterases: a new perspective based on their primary and tertiary structures. Protein Sci. 19, 1281 – 1295. | en_US |
dc.identifier.citedreference | Cantu, D.C., Chen, Y., Lemons, M.L. and Reilly, P.J. ( 2011 ) ThYme: a database for thioester‐active enzymes. Nucleic Acids Res. 39, D342 – D346. | en_US |
dc.identifier.citedreference | Cline, K. ( 1986 ) Import of proteins into chloroplasts. membrane integration of a thylakoid precursor protein reconstituted in chloroplast lysates. J. Biol. Chem. 261, 14804 – 14810. | en_US |
dc.identifier.citedreference | Collins, M.D. and Jones, D. ( 1981 ) Distribution of isoprenoid quinone structural types in bacteria and their taxonomic implication. Microbiol. Rev. 45, 316 – 354. | en_US |
dc.identifier.citedreference | Dillon, S.C. and Bateman, A. ( 2004 ) The hotdog fold: wrapping up a superfamily of thioesterases and dehydratases. BMC Bioinformatics, 5, 109. | en_US |
dc.identifier.citedreference | Douce, R., Bourguignon, J., Brouquisse, R. and Neuburger, M. ( 1987 ) Isolation of plant mitochondria: general principles and criteria of integrity. Methods Enzymol. 148, 403 – 415. | en_US |
dc.identifier.citedreference | Finn, R.D., Mistry, J., Tate, J. et al. ( 2010 ) The pfam protein families database. Nucleic Acids Res. 38, D211 – D222. | en_US |
dc.identifier.citedreference | Forner, J. and Binder, S. ( 2007 ) The red fluorescent protein eqFP611: application in subcellular localization studies in higher plants. BMC Plant Biol. 7, 28. | en_US |
dc.identifier.citedreference | Furt, F., Oostende, C., Widhalm, J.R., Dale, M.A., Wertz, J. and Basset, G.J. ( 2010 ) A bimodular oxidoreductase mediates the specific reduction of phylloquinone (vitamin K) in chloroplasts. Plant J. 64, 38 – 46. | en_US |
dc.identifier.citedreference | Garcion, C., Lohmann, A., Lamodiére, E., Catinot, J., Buchala, A., Doermann, P. and Metraux, J.P. ( 2008 ) Characterization and biological function of the ISOCHORISMATE SYNTHASE2 gene of arabidopsis. Plant Physiol. 147, 1279 – 1287. | en_US |
dc.identifier.citedreference | Gaudillière, J., d’Harlingue, A., Camara, B. and Monéger, R. ( 1984 ) Prenylation and methylation reactions in phylloquinone (vitamin K 1 ) synthesis in capsicum annuum plastids. Plant Cell Rep. 3, 240 – 242. | en_US |
dc.identifier.citedreference | Gross, J., Cho, W.K., Lezhneva, L., Falk, J., Krupinska, K., Shinozaki, K., Seki, M., Herrmann, R.G. and Meurer, J. ( 2006 ) A plant locus essential for phylloquinone (vitamin K1) biosynthesis originated from a fusion of four eubacterial genes. J. Biol. Chem. 281, 17189 – 17196. | en_US |
dc.identifier.citedreference | Gross, J., Meurer, J. and Bhattacharya, D. ( 2008 ) Evidence of a chimeric genome in the cyanobacterial ancestor of plastids. BMC Evol. Biol. 8, 117. | en_US |
dc.identifier.citedreference | Hajdukiewicz, P., Svab, Z. and Maliga, P. ( 1994 ) The small, versatile pPZP family of agrobacterium binary vectors for plant transformation. Plant Mol. Biol. 25, 989 – 994. | en_US |
dc.owningcollname | Interdisciplinary and Peer-Reviewed |
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