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- Creator:
- Urs, Karthik, Carlson, Jessica, Srinivas Manohar, Aditya, Rakowiecki, Michael, Alkayyali, Abdulhadi, Saunders, John E., Tulbah, Faris, and Moore, Talia Y.
- Description:
- Robotic models are useful for independently varying specific features, but most quadrupedal robots differ so greatly from animal morphologies that they have minimal evolutionary relevance. Commercially available quadrupedal robots are also prohibitively expensive for biological research programs and difficult to customize. Here, we present a low-cost quadrupedal robot with modular legs that can match a wide range of animal morphologies for biomechanical hypothesis testing. The Robot Of Theseus (TROT) costs ≈$4000 to build out of 3D printed parts and standard off-the-shelf supplies. Each limb consists of 2 or 3 rigid links; the proximal joint can be rotated to become a knee or elbow. Telescoping mechanisms vary the length of each limb link. The open-source software accommodates user-defined gaits and morphology changes. Effective leg length, or crouch, is determined by the four-bar linkage actuating each joint. The backdrivable motors can vary virtual spring stiffness and range of motion.
- Keyword:
- Robo-physical model, quadruped, locomotion, morphology, and biomechanics
- Citation to related publication:
- Urs, Carlson, Srinivas Manohar, Rakowiecki, Alkayyali, Saunders, Tulbah, Moore. (forthcoming) The Robot of Theseus: A modular robotic testbed for legged locomotion.
- Discipline:
- Engineering
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- Creator:
- Zhou, Lingxiao
- Description:
- A work that demonstrates enhancement by nearly two-orders of magnitude of the circular-polarized optical Stark effect in WSe₂ embedded into a Fabry Perot cavity, and use this mechanism to implement a XOR switch.
- Keyword:
- Nonlinear optics and Photonics
- Citation to related publication:
- Lingxiao Zhou, et al. Cavity-Floquet Engineering. Nature Communication (2024)
- Discipline:
- Science and Engineering
-
- Creator:
- Towne, Aaron, Saxton-Fox, Theresa, and Parthasarthy, Aadhy
- Description:
- This dataset contains experimental measurements of a zero-pressure-gradient flat-plate boundary layer at five different Reynolds numbers collected using particle image velocimetry. For each Reynolds number, the dataset contains approximately 6000 snapshots of planar velocity fields as well as raw particle image pairs. All data are stored within hdf5 files, and a Matlab script showing how the data can be read and manipulated is provided. Please see the ‘BLexp_README.pdf’ file for more information. We recommend using the ‘BLexp_example.zip’ file as an entry point to the dataset. and The dataset is part of “A database for reduced-complexity modeling of fluid flows” (see references below) and is intended to aid in the conception, training, demonstration, evaluation, and comparison of reduced-complexity models for fluid mechanics. The paper introduces the flow setup and computational methods, describes the available data, and provides an example of how these data can be used for reduced-complexity modeling. Users of these data should cite the papers listed below.
- Keyword:
- fluid mechanics
- Citation to related publication:
- Towne, A., Dawson, S., Brès, G. A., Lozano-Durán, A., Saxton-Fox, T., Parthasarthy, A., Biler, H., Jones, A. R., Yeh, C.-A., Patel, H., Taira, K. (2022). A database for reduced-complexity modeling of fluid flows. AIAA Journal 61(7): 2867-2892.
- Discipline:
- Engineering and Science
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- Creator:
- Herzog, Joshua M, Verkade, Angela, and Sick, Volker
- Description:
- Data deposited here includes 60 image sets (30 individual participants, and 2 eyes per individual) consisting of raw fluorescence images, diffuse reflection images using ambient lighting, images used for correction, and calibration, and metadata. Images are split into two wavelength bands as described in the methodology. Raw images are stored in Hierarchical Data Format 5 (HDF5) file nodes (one file per eye) and each image node contains a tag for frame rate, exposure duration, and timestamp (stored in ImageData.zip). Summary statistics including demographic data, participant-reported diseases (e.g., diabetes, keratoconus), and pupil size are also stored in a text-based comma-separated table and as an Excel spreadsheet. Finally, 2-channel pseudocolor images and ratiometric grayscale images combining the two fully-processed image bands are stored as portable network graphics (PNG) files (stored in PseudocolorImages.zip).
- Keyword:
- Fluorescence, Imaging, Ocular lens, Corneal disease, Cataract, and Diabetes
- Citation to related publication:
- Herzog, Joshua M., Verkade, Angela, and Sick, Volker. "Corneal shadowgraphy: a simple, low-cost, rapid, and quantitative tool with potential clinical utility." Manuscript in review. 2024. and Herzog, Joshua M., Verkade, Angela, and Sick, Volker. "Quantitative and rapid in vivo imaging of human lenticular fluorescence." Manuscript in review. 2024.
- Discipline:
- Health Sciences and Engineering
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- Creator:
- Whittaker, Collin B. and Jorns, Benjamin A.
- Description:
- This work characterized variability in the emitter geometry of a porous electrospray array thruster. It consists of raw topographic maps taken from the thruster, segmented versions of those maps that divide the measurement domain into individual sites within the array, and the geometric parameters describing each of those sites inferred by regressing a geometric model of an emitter against the data. It also includes copies of the computer code used to perform this analysis and plot the results, written in a combination of Python and MATLAB.
- Discipline:
- Engineering
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- Creator:
- Marks, Thomas A and Gorodetsky, Alex A
- Description:
- WarpX simulations of the 2D axial-azimuthal Hall thruster benchmark, as described in IEPC paper 409 (2024): https://www.thomasmarks.space/files/Marks_T_IEPC_2024_WarpX.pdf Contains one subdirectory: baseline_20us: 20 us of data, saved every 5000 iterations (32 GB) The data is in AMReX plotfile format.
- Keyword:
- hall thruster, plasma, pic, particle in cell, particle, cell, kinetic, electric propulsion, and thruster
- Citation to related publication:
- @inproceedings{marksWarpX2024, title = {Hall thruster simulations in {{Warp-X}}}, booktitle = {38th {{International Electric Propulsion Conference}}}, author = {Marks, Thomas A. and Gorodetsky, Alex A.}, year = {2024}, month = jun, address = {Toulouse, France} }
- Discipline:
- Engineering
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- Creator:
- El Shair, Zaid A. and Rawashdeh, Samir A.
- Description:
- The MEVDT dataset was created to fill a critical gap in event-based computer vision research by supplying a high-quality, real-world labeled dataset. Intended to facilitate the development of advanced algorithms for object detection and tracking applications, MEVDT includes multi-modal traffic scene data with synchronized grayscale images and high-temporal-resolution event streams. Additionally, it provides annotations for object detection and tracking with class labels, pixel-precise bounding box coordinates, and unique object identifiers. The dataset is organized into directories containing sequences of images and event streams, comprehensive ground truth labels, fixed-duration event samples, and data indexing sets for training and testing. and To access and utilize the dataset, researchers need specific software or scripts compatible with the data formats included, such as PNG for grayscale images, CSV for event stream data, AEDAT for the encoded fixed-duration event samples, and TXT for annotations. Recommended tools include standard image processing libraries for PNG files and CSV or text parsers for event data. A specialized Python script for reading AEDAT files is available at: https://github.com/Zelshair/cstr-event-vision/blob/main/scripts/data_processing/read_aedat.py, which streamlines access to the encoded event sample data.
- Keyword:
- Computer Vision, Event-Based Vision, Object Detection, Object Tracking, and Multi-Modal Vision Dataset
- Citation to related publication:
- El Shair, Z. and Rawashdeh, S., 2024. MEVDT: Multi-Modal Event-Based Vehicle Detection and Tracking Dataset. Data In Brief (under review)., El Shair, Z. and Rawashdeh, S.A., 2022. High-temporal-resolution object detection and tracking using images and events. Journal of Imaging, 8(8), p.210., El Shair, Z. and Rawashdeh, S., 2023. High-temporal-resolution event-based vehicle detection and tracking. Optical Engineering, 62(3), pp.031209-031209., and El Shair, Z.A., 2024. Advancing Neuromorphic Event-Based Vision Methods for Robotic Perception Tasks (Doctoral dissertation, University of Michigan-Dearborn).
- Discipline:
- Engineering
-
Estimates of the water balance of the Laurentian Great Lakes using the Large Lakes Statistical Water Balance Model (L2SWBM)
User Collection- Creator:
- Smith, Joeseph P., Fry, Lauren M., Do, Hong X., and Gronewold, Andrew D.
- Description:
- This collection contains estimates of the water balance of the Laurentian Great Lakes that were produced by the Large Lakes Statistical Water Balance Model (L2SWBM). Each data set has a different configuration and was used as the supplementary for a published peer-reviewed article (see "Citations to related material" section in the metadata of individual data sets). The key variables that were estimated by the L2SWBM are (1) over-lake precipitation, (2) over-lake evaporation, (3) lateral runoff, (4) connecting-channel outflows, (5) diversions, and (6) predictive changes in lake storage. and Contact: Andrew Gronewold Office: 4040 Dana Phone: (734) 764-6286 Email: drewgron@umich.edu
- Keyword:
- Great Lakes water levels, statistical inference, water balance, data assimilation, Great Lakes, Laurentian, Machine learning, Bayesian, and Network
- Citation to related publication:
- Smith, J. P., & Gronewold, A. D. (2017). Development and analysis of a Bayesian water balance model for large lake systems. arXiv preprint arXiv:1710.10161., Gronewold, A. D., Smith, J. P., Read, L., & Crooks, J. L. (2020). Reconciling the water balance of large lake systems. Advances in Water Resources, 103505., and Do, H.X., Smith, J., Fry, L.M., and Gronewold, A.D., Seventy-year long record of monthly water balance estimates for Earth’s largest lake system (under revision)
- Discipline:
- Science and Engineering
5Works -
- Creator:
- Huang, Cheng MI
- Description:
- This collection contains a hierarchy of test problems for turbulent reacting flow simulations. It is meant to provide a testbed to build reduced model for relevant challenging reacting flow problems using different methods. In addition, this collection also serves to engage a broad community of experts in computational science and the field of engineering to address certain challenges in constructing reduced models for reacting flow simulations. All the datasets in this collection were generated under the Air Force Center of Excellence on Multi-Fidelity Modeling of Rocket Combustion Dynamics and the goal of the center is to advance the state-of-the-art in Reduced Order Models (ROMs) and enable efficient and accurate prediction of instabilities in liquid fueled rocket combustion systems.
- Discipline:
- Engineering
2Works -
- Creator:
- Figueroa, Carlos A., Computational Vascular Biomechanics Lab, University of Michigan, and et al.
- Description:
- This collection concerns the CRIMSON (CardiovasculaR Integrated Modelling and SimulatiON) software environment. CRIMSON provides a powerful, customizable and user-friendly system for performing three-dimensional and reduced-order computational haemodynamics studies via a pipeline which involves: 1) segmenting vascular structures from medical images; 2) constructing analytic arterial and venous geometric models; 3) performing finite element mesh generation; 4) designing, and 5) applying boundary conditions; 6) running incompressible Navier-Stokes simulations of blood flow with fluid-structure interaction capabilities; and 7) post-processing and visualizing the results, including velocity, pressure and wall shear stress fields. , The minimum specifications to run CRIMSON are: Any AMD64 CPU (note: Intel Core i series are AMD64), Windows (only tested on Windows 10 but might work on Windows 7), 8 GB of RAM , If you are running non-trivial models you will want to have: Quad core CPU or higher, Solid state drive for storing data, Windows, 16 GB of RAM, Dedicated discrete GPU for rendering models. , and Software in this collection is a snapshot; please visit https://github.com/carthurs/CRIMSONGUI & www.crimson.software for more general information and the most up to date version of the software.
- Keyword:
- Blood Flow Simulation, Patient-specific, Open-source Software, Image-based simulation, Cardiovascular Medical Image, Segmentation, and Finite Element Simulation
- Citation to related publication:
- CRIMSON: An Open-Source Software Framework for Cardiovascular Integrated Modelling and Simulation C.J. Arthurs, R. Khlebnikov, A. Melville, et al. bioRxiv 2020.10.14.339960; doi: https://doi.org/10.1101/2020.10.14.339960
- Discipline:
- Health Sciences and Engineering
4Works