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Songbird Skeletal Image Dataset

Creator:

Weeks, Brian C

Description:

Each folder contains all of the data for a specific specimen; the folder names correspond to the University of Michigan Museum of Zoology catalog number for the specimen. The photographs have been used to measure skeletal traits using the Skelevision model, which is a computer vision approach to identifying and measuring elements of the skeleton (length of the tibiotarsus, tarsometatarsus, femur, humerus, ulna, radius, carpometacarpus, 2nd digit 1st phalanx, skull, and keel; the outer diameter of the sclerotic ring at its widest point; and the distance from the back of the skull to the tip of the bill). The dataset includes images of 12,421 specimens from 1,881 species of passerine birds.

Keyword:

Songbird skeletons, Functional traits, Comparative morphometrics, and Computer vision

Citation to related publication:

Weeks, B.C., Z. Zhou, C.M. Probst, J.S. Berv, B. O’Brien, B.W. Benz, H.R. Skeen, M. Ziebell, L. Bodt, and D.F. Fouhey. 2024. Skeletal trait measurements for thousands of bird species. bioRxiv. https://doi.org/10.1101/2024.12.19.629481 and Weeks, B.C., Z. Zhou, C.M. Probst, J.S. Berv, B. O’Brien, B.W. Benz, H.R. Skeen, M. Ziebell, L. Bodt, and D.F. Fouhey. 2024. Skeletal trait measurements for thousands of bird species. Scientific Data. https://doi.org/10.1038/s41597-025-05234-y

Discipline:

Science