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- Creator:
- University of Michigan Museum of Zoology
- Description:
- Scan of specimen ummz:mammals:102504 (Glirulus JAPONICUS) - Skull. Raw Dataset includes 1601 TIF images (each 1753 x 1433 x 1 voxel at 0.0207215 mm resolution, derived from 1601 scan projections), xtek and vgi files for volume reconstruction. and Scan of specimen ummz:mammals:102504 (Glirulus JAPONICUS) - Skull. Reconstructed Dataset includes 718 TIF images (each 1753 x 1433 x 1 voxel at 0.020722 mm resolution, derived from 1601 scan projections), xtek and vgi files for volume reconstruction.
- Keyword:
- Animalia, Chordata, Mammalia, Rodentia, Gliridae, Glirulus JAPONICUS, 1987308132, computed tomography, X-ray, and 3D
- Citation to related publication:
- For more information on the original UMMZ specimen, see: https://www.gbif.org/occurrence/1987308132
- Discipline:
- Science
-
- Creator:
- Penner-Hahn, James E, Alonso Mori, Roberto, Ardana-Lamas, Fernando , Biednov, Mykola , Chung, Taewon , Deb, Aniruddha, Jiang, Yifeng , Kaneshiro, April K. , Khakhulin, Dmitry , Kubarych, Kevin J. , Lamb, Ryan, Lima, Frederico Alves , McClain, Taylor P. , Meadows, Joseph H. , Michocki, Lindsay, Miller, Nicholas A. , Otte, Florian , Sension, Roseanne J, Sofferman, Danielle L. , Song, Sanghoon , Uemura, Yohei , and van Driel, Tim Brandt
- Description:
- The dataset contains the numerical data used to produce figures 2-14 and S1-S8 (Figure 1 is purely schematic and is uploaded as a tif file for completeness - it does not contain any new data). These files contain the transient UV-visible, X-ray absorption, and X-ray emission data that were used to characterize the dynamics of methyl cobalamin at neutral pH and to compare this to adenosyl cobalamin. Details of data collection and reduction are provided in the associated manuscript. Data files are all text files which contain tab-delimited columns of data corresponding to each figure in the manuscript.
- Keyword:
- Ultrafast, X-ray , Transient absorption , cobalamin , vitamin , B12 , XAS , XANES, and XES
- Citation to related publication:
- Journal of Physical Chemistry B, https://pubs.acs.org/doi/10.1021/acs.jpcb.4c03729
- Discipline:
- Science
-
- Creator:
- University of Michigan Museum of Zoology
- Description:
- Scan of specimen ummz:mammals:156532 (Chibchanomys TRICHOTIS) - Skull. Raw Dataset includes 1601 TIF images (each 604 x 629 x 1 voxel at 0.02709389 mm resolution, derived from 1601 scan projections), xtek and vgi files for volume reconstruction. and Scan of specimen ummz:mammals:156532 (Chibchanomys TRICHOTIS) - Skull. Reconstructed Dataset includes 1578 TIF images (each 604 x 629 x 1 voxel at 0.027094 mm resolution, derived from 1601 scan projections), xtek and vgi files for volume reconstruction.
- Keyword:
- Animalia, Chordata, Mammalia, Rodentia, Cricetidae, Chibchanomys TRICHOTIS, 1987287888, computed tomography, X-ray, and 3D
- Citation to related publication:
- For more information on the original UMMZ specimen, see: https://www.gbif.org/occurrence/1987287888
- Discipline:
- Science
-
- Creator:
- Wilson Mantilla, Jeffrey A.
- Description:
- The scanned humerus is an isolated element that is referred to the pterosaur Arambourgiania philadelphiae. The element is accessioned to Yarmouk University (YUPC-RUSEIFA-1) in the Hashemite Kingdom of Jordan. The specimen was collected from Late Cretaceous-aged sediments at the Ruseifa Quarry in central Jordan. For inquiries about access to the specimen, please contact Jeff Wilson Mantilla ( wilsonja@umich.edu) or Iyad Zalmout ( izalmout@ksu.edu.sa). Casts of this element of Arambourgiania are available at the University of Michigan Museum of Paleontology.
- Keyword:
- Jordan pterosaur cretaceous vertebrate gondwana afro-arabia paleontology
- Citation to related publication:
- Rosenbach, K. L., D. M. Goodvin, M. G. Albshysh, H. A. Azzam, A. A. Smadi, H. A. Mustafa, I. S. A. Zalmout, and J. A. Wilson Mantilla. [in press] New pterosaur remains from the Late Cretaceous of Afro-Arabia provide insight into flight capacity of large pterosaurs. Journal of Vertebrate Paleontology.
- Discipline:
- Science
-
- Creator:
- Wilson Mantilla, Jeffrey A.
- Description:
- The scanned proximal left humerus is part of an associated skeleton of the pterosaur Inabtanin alarabia, accessioned to Yarmouk University (YUPC-INAB-6-001–010) in the Hashemite Kingdom of Jordan. The specimen was collected from Late Cretaceous-aged sediments near Tal Inab in south-central Jordan, which is 34 km north of the current border with Saudi Arabia. For inquiries about access, please contact Jeff Wilson Mantilla ( wilsonja@umich.edu) or Iyad Zalmout ( izalmout@ksu.edu.sa). Casts of this and other elements of Inabtanin are available at the University of Michigan Museum of Paleontology.
- Keyword:
- Jordan pterosaur cretaceous vertebrate gondwana afro-arabia paleontology
- Citation to related publication:
- Rosenbach, K. L., D. M. Goodvin, M. G. Albshysh, H. A. Azzam, A. A. Smadi, H. A. Mustafa, I. S. A. Zalmout, and J. A. Wilson Mantilla. [in press] New pterosaur remains from the Late Cretaceous of Afro-Arabia provide insight into flight capacity of large pterosaurs. Journal of Vertebrate Paleontology.
- Discipline:
- Science
-
- Creator:
- Wilson Mantilla, Jeffrey A.
- Description:
- The scanned distal right humerus is part of an associated skeleton of the pterosaur Inabtanin alarabia, accessioned to Yarmouk University (YUPC-INAB-6-001–010) in the Hashemite Kingdom of Jordan. The specimen was collected from Late Cretaceous-aged sediments near Tal Inab in south-central Jordan, which is 34 km north of the current border with Saudi Arabia. For inquiries about access, please contact Jeff Wilson Mantilla ( wilsonja@umich.edu) or Iyad Zalmout ( izalmout@ksu.edu.sa). Casts of this and other elements of Inabtanin alarabia are available at the University of Michigan Museum of Paleontology.
- Keyword:
- Jordan pterosaur cretaceous vertebrate gondwana afro-arabia paleontology
- Citation to related publication:
- Rosenbach, K. L., D. M. Goodvin, M. G. Albshysh, H. A. Azzam, A. A. Smadi, H. A. Mustafa, I. S. A. Zalmout, and J. A. Wilson Mantilla. [in press] New pterosaur remains from the Late Cretaceous of Afro-Arabia provide insight into flight capacity of large pterosaurs. Journal of Vertebrate Paleontology.
- Discipline:
- Science
-
- Creator:
- Wilson Mantilla, Jeffrey A.
- Description:
- The 3D model of the humerus was created from an isolated element that is referred to the pterosaur Arambourgiania philadelphiae. The element is accessioned to Yarmouk University (YUPC-RUSEIFA-1) in the Hashemite Kingdom of Jordan. The specimen was collected from Late Cretaceous-aged sediments at the Ruseifa Quarry in central Jordan. For inquiries about access to the specimen, please contact Jeff Wilson Mantilla ( wilsonja@umich.edu) or Iyad Zalmout ( izalmout@ksu.edu.sa). Casts of this element of Arambourgiania are available at the University of Michigan Museum of Paleontology.
- Keyword:
- Jordan pterosaur cretaceous vertebrate gondwana afro-arabia paleontology
- Citation to related publication:
- Rosenbach, K. L., D. M. Goodvin, M. G. Albshysh, H. A. Azzam, A. A. Smadi, H. A. Mustafa, I. S. A. Zalmout, and J. A. Wilson Mantilla. [in press] New pterosaur remains from the Late Cretaceous of Afro-Arabia provide insight into flight capacity of large pterosaurs. Journal of Vertebrate Paleontology.
- Discipline:
- Science
-
- Creator:
- Wilson Mantilla, Jeffrey A.
- Description:
- The left humerus is part of an associated skeleton of the pterosaur Inabtanin alarabia, accessioned to Yarmouk University (YUPC-INAB-6-001–010) in the Hashemite Kingdom of Jordan. The specimen was collected from Late Cretaceous-aged sediments near Tal Inab in south-central Jordan, which is 34 km north of the current border with Saudi Arabia. For inquiries about access, please contact Jeff Wilson Mantilla ( wilsonja@umich.edu) or Iyad Zalmout ( izalmout@ksu.edu.sa). Casts of this and other elements of Inabtanin alarabia are available at the University of Michigan Museum of Paleontology.
- Keyword:
- Jordan pterosaur cretaceous vertebrate gondwana afro-arabia paleontology
- Citation to related publication:
- Rosenbach, K. L., D. M. Goodvin, M. G. Albshysh, H. A. Azzam, A. A. Smadi, H. A. Mustafa, I. S. A. Zalmout, and J. A. Wilson Mantilla. [in press] New pterosaur remains from the Late Cretaceous of Afro-Arabia provide insight into flight capacity of large pterosaurs. Journal of Vertebrate Paleontology.
- Discipline:
- Science
-
- Creator:
- University of Michigan Museum of Zoology
- Description:
- Scan of specimen ummz:mammals:39512 (Caracal aurata) - Skull. Raw Dataset includes 1601 TIF images (each 1330 x 1943 x 1 voxel at 0.08283362 mm resolution, derived from 1601 scan projections), xtek and vgi files for volume reconstruction. and Scan of specimen ummz:mammals:39512 (Caracal aurata) - Skull. Reconstructed Dataset includes 1204 TIF images (each 1330 x 1943 x 1 voxel at 0.082834 mm resolution, derived from 1601 scan projections), xtek and vgi files for volume reconstruction.
- Keyword:
- Animalia, Chordata, Mammalia, Carnivora, Felidae, Caracal aurata, 1987234412, computed tomography, X-ray, and 3D
- Citation to related publication:
- For more information on the original UMMZ specimen, see: https://www.gbif.org/occurrence/1987234412
- Discipline:
- Science
-
- Creator:
- University of Michigan Museum of Zoology
- Description:
- Scan of specimen ummz:mammals:166879 (Blarina brevicauda kirtlandi) - WholeBody. Raw Dataset includes 3141 TIF images (each 858 x 1378 x 1 voxel at 0.03537455 mm resolution, derived from 3141 scan projections), xtek and vgi files for volume reconstruction. and Scan of specimen ummz:mammals:166879 (Blarina brevicauda kirtlandi) - WholeBody. Reconstructed Dataset includes 1775 TIF images (each 858 x 1378 x 1 voxel at 0.035375 mm resolution, derived from 3141 scan projections), xtek and vgi files for volume reconstruction.
- Keyword:
- Animalia, Chordata, Mammalia, Soricomorpha, Soricidae, Blarina brevicauda kirtlandi, 1987306057, computed tomography, X-ray, 3D, and DiceCT
- Citation to related publication:
- For more information on the original UMMZ specimen, see: https://www.gbif.org/occurrence/1987306057
- Discipline:
- Science
-
- Creator:
- University of Michigan Museum of Zoology
- Description:
- Scan of specimen ummz:mammals:166879 (Blarina brevicauda kirtlandi) - WholeBody. Raw Dataset includes 3141 TIF images (each 1237 x 1972 x 1 voxel at 0.01845421 mm resolution, derived from 3141 scan projections), xtek and vgi files for volume reconstruction. and Scan of specimen ummz:mammals:166879 (Blarina brevicauda kirtlandi) - WholeBody. Reconstructed Dataset includes 1363 TIF images (each 1237 x 1972 x 1 voxel at 0.018454 mm resolution, derived from 3141 scan projections), xtek and vgi files for volume reconstruction.
- Keyword:
- Animalia, Chordata, Mammalia, Soricomorpha, Soricidae, Blarina brevicauda kirtlandi, 1987306057, computed tomography, X-ray, 3D, and DiceCT
- Citation to related publication:
- For more information on the original UMMZ specimen, see: https://www.gbif.org/occurrence/1987306057
- Discipline:
- Science
-
- Creator:
- University of Michigan Museum of Zoology
- Description:
- Scan of specimen ummz:mammals:166890 (Blarina brevicauda kirtlandi) - WholeBody. Raw Dataset includes 3141 TIF images (each 771 x 848 x 1 voxel at 0.03842772 mm resolution, derived from 3141 scan projections), xtek and vgi files for volume reconstruction. and Scan of specimen ummz:mammals:166890 (Blarina brevicauda kirtlandi) - WholeBody. Reconstructed Dataset includes 1930 TIF images (each 771 x 848 x 1 voxel at 0.038428 mm resolution, derived from 3141 scan projections), xtek and vgi files for volume reconstruction.
- Keyword:
- Animalia, Chordata, Mammalia, Soricomorpha, Soricidae, Blarina brevicauda kirtlandi, 1987283573, computed tomography, X-ray, 3D, and DiceCT
- Citation to related publication:
- For more information on the original UMMZ specimen, see: https://www.gbif.org/occurrence/1987283573
- Discipline:
- Science
-
- Creator:
- University of Michigan Museum of Zoology
- Description:
- Scan of specimen ummz:mammals:166890 (Blarina brevicauda kirtlandi) - WholeBody. Raw Dataset includes 3141 TIF images (each 1410 x 1429 x 1 voxel at 0.01845421 mm resolution, derived from 3141 scan projections), xtek and vgi files for volume reconstruction. and Scan of specimen ummz:mammals:166890 (Blarina brevicauda kirtlandi) - WholeBody. Reconstructed Dataset includes 1783 TIF images (each 1410 x 1429 x 1 voxel at 0.018454 mm resolution, derived from 3141 scan projections), xtek and vgi files for volume reconstruction.
- Keyword:
- Animalia, Chordata, Mammalia, Soricomorpha, Soricidae, Blarina brevicauda kirtlandi, 1987283573, computed tomography, X-ray, 3D, and DiceCT
- Citation to related publication:
- For more information on the original UMMZ specimen, see: https://www.gbif.org/occurrence/1987283573
- Discipline:
- Science
-
- Creator:
- University of Michigan Museum of Zoology
- Description:
- Scan of specimen ummz:mammals:166894 (Blarina brevicauda kirtlandi) - WholeBody. Raw Dataset includes 3141 TIF images (each 926 x 1417 x 1 voxel at 0.03361506 mm resolution, derived from 3141 scan projections), xtek and vgi files for volume reconstruction. and Scan of specimen ummz:mammals:166894 (Blarina brevicauda kirtlandi) - WholeBody. Reconstructed Dataset includes 1951 TIF images (each 926 x 1417 x 1 voxel at 0.033615 mm resolution, derived from 3141 scan projections), xtek and vgi files for volume reconstruction.
- Keyword:
- Animalia, Chordata, Mammalia, Soricomorpha, Soricidae, Blarina brevicauda kirtlandi, 1987312630, computed tomography, X-ray, 3D, and DiceCT
- Citation to related publication:
- For more information on the original UMMZ specimen, see: https://www.gbif.org/occurrence/1987312630
- Discipline:
- Science
-
- Creator:
- University of Michigan Museum of Zoology
- Description:
- Scan of specimen ummz:mammals:166894 (Blarina brevicauda kirtlandi) - WholeBody. Raw Dataset includes 3141 TIF images (each 1760 x 1210 x 1 voxel at 0.01941239 mm resolution, derived from 3141 scan projections), xtek and vgi files for volume reconstruction. and Scan of specimen ummz:mammals:166894 (Blarina brevicauda kirtlandi) - WholeBody. Reconstructed Dataset includes 1678 TIF images (each 1760 x 1210 x 1 voxel at 0.019412 mm resolution, derived from 3141 scan projections), xtek and vgi files for volume reconstruction.
- Keyword:
- Animalia, Chordata, Mammalia, Soricomorpha, Soricidae, Blarina brevicauda kirtlandi, 1987312630, computed tomography, X-ray, 3D, and DiceCT
- Citation to related publication:
- For more information on the original UMMZ specimen, see: https://www.gbif.org/occurrence/1987312630
- Discipline:
- Science
-
- Creator:
- University of Michigan Museum of Zoology
- Description:
- Scan of specimen ummz:mammals:116648 (Nyctereutes procyonoides) - Skull. Raw Dataset includes 1601 TIF images (each 898 x 983 x 1 voxel at 0.06401958 mm resolution, derived from 1601 scan projections), xtek and vgi files for volume reconstruction. and Scan of specimen ummz:mammals:116648 (Nyctereutes procyonoides) - Skull. Reconstructed Dataset includes 1948 TIF images (each 898 x 983 x 1 voxel at 0.064020 mm resolution, derived from 1601 scan projections), xtek and vgi files for volume reconstruction.
- Keyword:
- Animalia, Chordata, Mammalia, Carnivora, Canidae, Nyctereutes procyonoides, 1987242635, computed tomography, X-ray, and 3D
- Citation to related publication:
- For more information on the original UMMZ specimen, see: https://www.gbif.org/occurrence/1987242635
- Discipline:
- Science
-
- Creator:
- Towne, Aaron, Saxton-Fox, Theresa, and Parthasarthy, Aadhy
- Description:
- This dataset contains experimental measurements of a zero-pressure-gradient flat-plate boundary layer at five different Reynolds numbers collected using particle image velocimetry. For each Reynolds number, the dataset contains approximately 6000 snapshots of planar velocity fields as well as raw particle image pairs. All data are stored within hdf5 files, and a Matlab script showing how the data can be read and manipulated is provided. Please see the ‘BLexp_README.pdf’ file for more information. We recommend using the ‘BLexp_example.zip’ file as an entry point to the dataset. and The dataset is part of “A database for reduced-complexity modeling of fluid flows” (see references below) and is intended to aid in the conception, training, demonstration, evaluation, and comparison of reduced-complexity models for fluid mechanics. The paper introduces the flow setup and computational methods, describes the available data, and provides an example of how these data can be used for reduced-complexity modeling. Users of these data should cite the papers listed below.
- Keyword:
- fluid mechanics
- Citation to related publication:
- Towne, A., Dawson, S., Brès, G. A., Lozano-Durán, A., Saxton-Fox, T., Parthasarthy, A., Biler, H., Jones, A. R., Yeh, C.-A., Patel, H., Taira, K. (2022). A database for reduced-complexity modeling of fluid flows. AIAA Journal 61(7): 2867-2892.
- Discipline:
- Engineering and Science
-
- Creator:
- Su, Xue, Zhang, Youxue, and Liu, Yang
- Description:
- Our recent investigations have discovered inward diffusion (in-gassing) of moderately volatile elements (MVEs; e.g., Na, K and Cu) from volcanic gas into volcanic beads/droplets. In this work, we examine the distribution of sulfur in lunar orange glass beads. Our analyses reveal that sulfur exhibits a non-uniform distribution across the beads, forming "U" or "W" shaped profiles typical of in-gassing. A model developed to assess sulfur contributions from different sources (original magmatic sulfur versus atmospheric in-gassed sulfur) in the orange beads indicates that atmospheric sulfur in-gassed during eruption contributes approximately 9–24% to the total sulfur content of an orange bead, averaging around 16%. This in-gassed sulfur is derived from the eruption plume, where atmospheric sulfur could undergo photochemical reactions induced by UV light, leading to mass independent fractionation and a distinct sulfur isotope signature. Interestingly, a recent study discovered a small mass independent isotope fractionation of sulfur in lunar orange glass beads in drive tube 74002/1 and a lack of such mass independent isotope fractionation in black glass beads in the same lunar sample. This finding contrasts with sulfur in lunar basalts, which typically exhibit mass dependent fractionation. With our work, the observed mass independent fractionation signal in sulfur isotopes of orange beads can be attributed to the in-gassing of photolytic sulfur in the optically thin part of the eruption plume where UV light can penetrate. Using the sulfur isotope data of lunar orange beads, we estimate that the Δ33S value of atmospheric sulfur is approximately −0.18‰. Our study provides new insights into the complex dynamics of volatile elements in lunar volcanic processes, highlighting the role of in-gassing in shaping sulfur isotope signatures in volcanic glass beads.
- Keyword:
- Moon, Lunar orange glass beads, Sulfur, Sulfur isotope, Diffusion, Outgassing and in-gassing, Mass independent fractionation, and Eruption plume
- Citation to related publication:
- Su, X., Zhang, Y., Liu, Y. (2024) Sulfur Outgassing and In-gassing in Lunar Orange Glass Beads and Implications for 33S “Anomaly” in the Moon. (under review)
- Discipline:
- Science
-
- Creator:
- Reynolds, Mack B, Klein, Benjamin, McFadden, Michael J, Judge, Norah K, Navarrete, Hannah E, Michmerhuizen, Britton C, Awad, Dominik, Schultz, Tracey L, Harms, Paul W, Zhang, Li, O'Meara, Teresa R, Sexton, Jonathan Z, Lyssiotis, Costas A, Kahlenberg, J Michelle, and O'Riordan, Mary X
- Description:
- Targeted metabolomics analysis of primary WT murine bone marrow-derived macrophages (BMDM) mock-treated or infected with methicillin-resistant Staphylococcus aureus (MRSA) (File S1). Targeted metabolomics analysis of mock-treated or MRSA-infected WT or Ifnar1-/- iBMDM (File S2).
- Keyword:
- Metabolomics, Macrophage, Staphylococcus aureus, and Interferon
- Citation to related publication:
- Type I interferon governs immunometabolic checkpoints that coordinate inflammation during Staphylococcal infection Mack B. Reynolds, Benjamin Klein, Michael J. McFadden, Norah K. Judge, Hannah E. Navarrete, Britton C Michmerhuizen, Dominik Awad, Tracey L. Schultz, Paul W. Harms, Li Zhang, Teresa R. O’Meara, Jonathan Z. Sexton, Costas A. Lyssiotis, J. Michelle Kahlenberg, Mary X. O’Riordan bioRxiv 2024.01.10.575104; doi: https://doi.org/10.1101/2024.01.10.575104 and Reynolds et al., Type I Interferon governs immunometabolic checkpoints that coordinate inflammation during Staphylococcal infection, Cell Reports (2024), https://doi.org/10.1016/j.celrep.2024.114607
- Discipline:
- Science
-
- Creator:
- University of Michigan Museum of Zoology
- Description:
- Scan of specimen ummz:mammals:100776 (Erignathus barbatus barbatus) - Skull. Raw Dataset includes 1601 TIF images (each 1385 x 1900 x 1 voxel at 0.09676982 mm resolution, derived from 1601 scan projections), xtek and vgi files for volume reconstruction. and Scan of specimen ummz:mammals:100776 (Erignathus barbatus barbatus) - Skull. Reconstructed Dataset includes 1440 TIF images (each 1385 x 1900 x 1 voxel at 0.096770 mm resolution, derived from 1601 scan projections), xtek and vgi files for volume reconstruction.
- Keyword:
- Animalia, Chordata, Mammalia, Carnivora, Phocidae, Erignathus barbatus barbatus, 1987312444, computed tomography, X-ray, and 3D
- Citation to related publication:
- For more information on the original UMMZ specimen, see: https://www.gbif.org/occurrence/1987312444
- Discipline:
- Science