Objective models for steroid binding sites of human globulins
dc.contributor.author | Schnitker, Jurgen | en_US |
dc.contributor.author | Gopalaswamy, Ramesh | en_US |
dc.contributor.author | Crippen, Gordon M. | en_US |
dc.date.accessioned | 2006-09-08T20:55:02Z | |
dc.date.available | 2006-09-08T20:55:02Z | |
dc.date.issued | 1997-01 | en_US |
dc.identifier.citation | Schnitker, Jurgen; Gopalaswamy, Ramesh; Crippen, Gordon M.; (1997). "Objective models for steroid binding sites of human globulins." Journal of Computer-Aided Molecular Design 11(1): 93-110. <http://hdl.handle.net/2027.42/42963> | en_US |
dc.identifier.issn | 0920-654X | en_US |
dc.identifier.issn | 1573-4951 | en_US |
dc.identifier.uri | https://hdl.handle.net/2027.42/42963 | |
dc.identifier.uri | http://www.ncbi.nlm.nih.gov/sites/entrez?cmd=retrieve&db=pubmed&list_uids=9139117&dopt=citation | en_US |
dc.description.abstract | We report the application of a recently developed alignment-free 3D QSAR method [Crippen,G.M., J. Comput. Chem., 16 (1995) 486] to a benchmark-type problem. The test systeminvolves the binding of 31 steroid compounds to two kinds of human carrier protein. Themethod used not only allows for arbitrary binding modes, but also avoids the problems oftraditional least-squares techniques with regard to the implicit neglect of informative outlyingdata points. It is seen that models of considerable predictive power can be obtained even witha very vague binding site description. Underlining a systematic, but usually ignored, problemof the QSAR approach, there is not one unique type of model but, rather, an entire manifoldof distinctly different models that are all compatible with the experimental information. Fora given model, there is also a considerable variation in the found binding modes, illustratingthe problems that are inherent in the need for ’correct‘ molecular alignment in conventional3D QSAR methods. | en_US |
dc.format.extent | 169863 bytes | |
dc.format.extent | 3115 bytes | |
dc.format.mimetype | application/pdf | |
dc.format.mimetype | text/plain | |
dc.language.iso | en_US | |
dc.publisher | Kluwer Academic Publishers; Springer Science+Business Media | en_US |
dc.subject.other | Chemistry | en_US |
dc.subject.other | Computer Applications in Chemistry | en_US |
dc.subject.other | Physical Chemistry | en_US |
dc.subject.other | Animal Anatomy / Morphology / Histology | en_US |
dc.subject.other | QSAR | en_US |
dc.subject.other | Voronoi | en_US |
dc.subject.other | Receptor Mapping | en_US |
dc.subject.other | Steroids | en_US |
dc.title | Objective models for steroid binding sites of human globulins | en_US |
dc.type | Article | en_US |
dc.subject.hlbsecondlevel | Materials Science and Engineering | en_US |
dc.subject.hlbsecondlevel | Chemistry | en_US |
dc.subject.hlbsecondlevel | Chemical Engineering | en_US |
dc.subject.hlbtoplevel | Science | en_US |
dc.subject.hlbtoplevel | Engineering | en_US |
dc.description.peerreviewed | Peer Reviewed | en_US |
dc.contributor.affiliationum | College of Pharmacy, University of Michigan, 428 Church Street, Ann Arbor, MI, 48109-1065, U.S.A. | en_US |
dc.contributor.affiliationum | College of Pharmacy, University of Michigan, 428 Church Street, Ann Arbor, MI, 48109-1065, U.S.A. | en_US |
dc.contributor.affiliationum | College of Pharmacy, University of Michigan, 428 Church Street, Ann Arbor, MI, 48109-1065, U.S.A. | en_US |
dc.contributor.affiliationumcampus | Ann Arbor | en_US |
dc.identifier.pmid | 9139117 | en_US |
dc.description.bitstreamurl | http://deepblue.lib.umich.edu/bitstream/2027.42/42963/1/10822_2004_Article_199064.pdf | en_US |
dc.identifier.doi | http://dx.doi.org/10.1023/A:1008031629127 | en_US |
dc.identifier.source | Journal of Computer-Aided Molecular Design | en_US |
dc.owningcollname | Interdisciplinary and Peer-Reviewed |
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