Index Catalog // Deep Blue Data

Literature search files for Firearm violence among LGBTQ+ communities: A scoping review and future directions

Creator:: Saylor, Kate M., King, Wesley M., and Gamarel, Kristi E.
Description:: The search data supports a literature review project on Firearm violence among LGBTQ+ communities. The data included in the dataset are the reproducible search strategies (txt file) and the exported results of all citations from all databases (txt, ris, and.nbib files). These searches and exported result files contain all citations originating from the database searches that were considered for inclusion.
Keyword:: LGBTQ, Transgender, Firearms
Discipline:: Health Sciences

Lu-177 DOTATATE Anonymized Patient Datasets: Multi-Time Point Lu-177 SPECT/CT Scans

Creator:: Dewaraja, Yuni K and Van, Benjamin J
Description:: This publication contains anonymized SPECT/CT scans of two patients. Patient scans were taken at 4 different time points in the week following a therapeutic dose of Lu-177 DOTATATE. Both the SPECT and the co-registered CT are provided. All images are in DICOM format.
Keyword:: Lu-177, Dosimetry, Radionuclide, SPECT, and CT
Discipline:: Health Sciences

Y-90 PET/CT & SPECT/CT and Corresponding Contours Dataset 31JULY2020

Creator:: Van, Benjamin J. and Dewaraja, Yuni K.
Description:: Interest in quantitative imaging of Y-90 is growing because transarterial radioembolization (RE) with Y-90 loaded microspheres is a promising and minimally invasive treatment that is FDA approved for unresectable primary and metastatic liver tumors. These cancers are a leading cause of cancer mortality and morbidity. Radioembolization is a therapy that irradiates liver tumors with radioactive microspheres administered through a microcatheter placed in the hepatic arterial vasculature. Radioembolization is based on the principle that healthy liver and tumor are mainly vascularized by the portal vein and the hepatic artery respectively. As a result, radioactive microspheres are preferentially located in the lesions after they are administered via the hepatic artery.
Keyword:: Y-90, PET, SPECT, CT, Segmentation, Organ, Tumor, Label, Microsphere, Radioembolization, and SIRT
Citation to related publication:: Van, B. J., Dewaraja, Y. K., Sangogo, M. L., & Mikell, J. K. (2021). Y-90 SIRT: Evaluation of TCP variation across dosimetric models. EJNMMI Physics, 8(1), 45. https://doi.org/10.1186/s40658-021-00391-6
Discipline:: Health Sciences

Data pertaining to Article: Air Quality Impacts at an E-Waste Site in Ghana using Flexible, Low-Cost and Quality Assured Measurements

Creator:: Batterman, Stuart; University of Michigan
Description:: We evaluated PM levels at the Agbogbloshie e-waste and scrap yard site in Accra, Ghana, and at upwind and downwind locations. This monitoring forms part of the West Africa-Michigan Charter II for GEOHealth cohort study, which is analyzing occupational exposures and health risks at this site.
Keyword:: Air pollution, particulate matter, e-waste, Fires, and monitoring
Citation to related publication:: Kwarteng, L., Baiden, E. A., Fobil, J., Arko-Mensah, J., Robins, T., & Batterman, S. (2020). Air Quality Impacts at an E-Waste Site in Ghana Using Flexible, Moderate-Cost and Quality-Assured Measurements. GeoHealth, 4(8), e2020GH000247. https://doi.org/10.1029/2020GH000247
Discipline:: Health Sciences and Engineering

Data from: Adjuvant Radiation Improves Recurrence-Free Survival and Overall Survival in Adrenocortical Carcinoma

Creator:: Gharzai, Laila A, Green, Michael D, Griffith, Kent A, and Jolly, Shruti
Description:: Three sensitivity analyses were performed. First, a second matching step was performed in which two controls were selected for each case, where possible using a nearest neighbor and caliper metric. Controls needed to have propensity scores within 0.1 of the case to be selected. Thirty-eight of the 39 cases had at least one control using this method and for 36 cases two controls could be selected. The average difference between case and control propensity adjuvant RT was 0.008 (range 0.00003-0.095). A second sensitivity analysis was performed to guard against immortal time bias. In order to mitigate the possibility of this effect, cases known not to have undergone adjuvant RT have been screened for suitable follow-up without a recurrence (local or regional recurrence, metastatic failure, and/or death) to ensure that if adjuvant RT had been prescribed as part of the multi-modality treatment regimen, that it would have been initiated. Three months was selected as the mandatory follow-up time. One to one matching was carried out and all 39 cases were matched to a control. A third sensitivity analysis was performed to account for stage migration seen in control patients that presented to the University of Michigan with more advanced disease. Patients that underwent adjuvant radiation were matched one to one with control group patients who did not receive adjuvant radiation, and who had the same stage at diagnosis as compared to stage at University of Michigan presentation.
Keyword:: adenocortical carcinoma and English
Citation to related publication:: Laila A Gharzai, Michael D Green, Kent A Griffith, Tobias Else, Charles S Mayo, Elizabeth Hesseltine, Daniel E Spratt, Edgar Ben-Josef, Aaron Sabolch, Barbara S Miller, Francis Worden, Thomas J Giordano, Gary D Hammer, Shruti Jolly, Adjuvant Radiation Improves Recurrence-Free Survival and Overall Survival in Adrenocortical Carcinoma, The Journal of Clinical Endocrinology & Metabolism, Volume 104, Issue 9, September 2019, Pages 3743–3750, https://doi.org/10.1210/jc.2019-00029
Discipline:: Health Sciences

Transmission of Oral microbiome and Sequencing - Influenza Susceptibility

Creator:: Lee, Kyu Han, Foxman, Betsy, and Gordon, Aubree
Description:: Data include variables used to run mixed effects models examining the association between the nose/throat microbiome and influenza virus infection. Certain individual participant data have been excluded due to identifiability concerns. Data also include the oligotype count table and taxonomic classifications. and Curation Notes: Readme updated Nov. 29, 2018 with context for oligotype and taxonomy files, and citation to associated article.
Keyword:: Influenza and Microbiome
Citation to related publication:: Lee KH, Gordon A, Shedden K, Kuan G, Ng S, Balmaseda A, Foxman B. The respiratory microbiome and susceptibility to influenza virus infection. PloS One. 2019;14:e0207898. https://doi.org/10.1371/journal.pone.0207898
Discipline:: Health Sciences

Downloaded IAAF Sprint Results in all Heats for 2004 - 2016 Olympics for both Men and Women

Creator:: Mirshams Shahshahani, Payam
Description:: Investigating minimum human reaction times is often confounded by the motivation, training, and state of arousal of the subjects. We used the reaction times of athletes competing in the shorter sprint events in the Athletics competitions in recent Olympics (2004-2016) to determine minimum human reaction times because there's little question as to their motivation, training, or state of arousal. The reaction times of sprinters however are only available on the IAAF web page for each individual heat, in each event, at each Olympic. Therefore we compiled all these data into two separate excel sheets which can be used for further analyses.
Keyword:: minimum reaction time, sprinter, Olympics, Athletics, sex difference, starting block, and false start
Citation to related publication:: Mirshams Shahshahani P, Lipps DB, Galecki AT, Ashton-Miller JA (2018) On the apparent decrease in Olympic sprinter reaction times. PLoS ONE 13(6): e0198633. https://doi.org/10.1371/journal.pone.0198633
Discipline:: Engineering, Health Sciences, Science, Other, and General Information Sources

Supporting data and scripts for the paper "Variability in the location of High Frequency Oscillations during prolonged intracranial EEG recordings"

Creator:: Gliske, Stephen V and Stacey, William C
Description:: This data is part of a large program to translate detection and interpretation of HFOs into clinical use. A zip file is included which contains hfo detections, metadata, and Matlab scripts. The matlab scripts analyze this input data and produce figures as in the referenced paper (note: the blind source separation method is stochastic, and so the figures may not be exactly the same). A file "README.txt" provides more detail about each individual file within the zip file.
Keyword:: hfo, high frequency oscillation, ripple, fast ripple, blind source separation, non-negative matrix factorization, and temporal variability
Citation to related publication:: Stephen V. Gliske, Zachary T. Irwin, Cynthia Chestek, Garnett L. Hegeman, Benjamin Brinkmann, Oren Sagher, Hugh J. L. Garton, Greg A. Worrell, William C. Stacey. "Variability in the location of High Frequency Oscillations during prolonged intracranial EEG recordings." Nature Communications. https://doi.org/10.1038/s41467-018-04549-2
Discipline:: Science, Engineering, and Health Sciences

Maternal and Infant Survival Study (MISS) Interviews with Health Care Providers in Ghana about Neonatal Near-Misses

Creator:: Moyer, Cheryl A
Description:: Data reflect the knowledge, attitudes, and beliefs of health care providers regarding neonatal near-misses in Neonatal Intensive Care Units (NICUs) in southern Ghana.
Keyword:: qualitative methods, neonatal mortality, neonatal near-misses, and developing country
Citation to related publication:: Bell, A.J., Wynn, L.V., Bakari, A., Oppong, S.A., Youngblood, J., Arku, Z., Bockarie, Y., Adu, J., Wobil, P., Plange-Rhule, G., Goka, B., Adanu, R.M., Moyer, C.A., 2018. “We call them miracle babies”: How health care providers understand neonatal near-misses at three teaching hospitals in Ghana. PLOS ONE 13, e0198169. https://doi.org/10.1371/journal.pone.0198169
Discipline:: Health Sciences

Neighborhood effects : Health Status

Creator:: Veinot,Tiffany,C., Michigan Department of Health & Human Services, U.S. Census Bureau, American Community Survey, Data Driven Detroit, Okullo, Dolorence, and Michigan Department of Vital Statistics
Description:: Health status data includes data about the health of persons within a census tract in Metropolitan Detroit, measured at the census tract level. This includes data about 1) mortality by condition; 2) exposures to toxic substances; and 3) disability. Coverage for all data: 10-county Detroit-Warren-Ann Arbor Combined Statistical Area.
Keyword:: Community Health, Mortality Rates by Condition , Disability, Elevated Blood Lead Levels, Census Tract level, All-Cause Mortality Rates, and Spatial Measures
Discipline:: Health Sciences and Social Sciences

Literature search files for Firearm violence among LGBTQ+ communities: A scoping review and future directions

Lu-177 DOTATATE Anonymized Patient Datasets: Multi-Time Point Lu-177 SPECT/CT Scans

Y-90 PET/CT & SPECT/CT and Corresponding Contours Dataset 31JULY2020

Data pertaining to Article: Air Quality Impacts at an E-Waste Site in Ghana using Flexible, Low-Cost and Quality Assured Measurements

Data from: Adjuvant Radiation Improves Recurrence-Free Survival and Overall Survival in Adrenocortical Carcinoma

Transmission of Oral microbiome and Sequencing - Influenza Susceptibility

Downloaded IAAF Sprint Results in all Heats for 2004 - 2016 Olympics for both Men and Women

Supporting data and scripts for the paper "Variability in the location of High Frequency Oscillations during prolonged intracranial EEG recordings"

Maternal and Infant Survival Study (MISS) Interviews with Health Care Providers in Ghana about Neonatal Near-Misses

Neighborhood effects : Health Status

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